Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1748 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGCGAGCACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGTGGACCTGACCCTTCAACCTACAGATACAACAGGACTGAAGCTTTGGCAGGGGACTGGTTCTGCAACTGTGGTGCTCACAACTATGCTAGTCGATCAAGCTGCTACAGATGTAGCACAATGAAAGATGGTTACTCTTCTGGATATGCCAACAACTCTGGTGGATATGGATCTGACACTTCCCCCCCAGGATGGAAAACTGGAGACTGGCTTTGCCCAAGAATCGGCTGTGGAGTACATAATTATGCTAGCAGGACAGAATGCTTCAGATGCAAAATGCCAAGGGATTTTGGTGAGAAAGTTTAA 402 0.4701 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGAHNYASRSSCYRCSTMKDGYSSGYANNSGGYGSDTSPPGWKTGDWLCPRIGCGVHNYASRTECFRCKMPRDFGEKV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1748 133 ProSitePatterns Zinc finger RanBP2-type signature. 102 123 IPR001876 -
Aed6g1748 133 PANTHER ZINC FINGER PROTEIN 1 130 - -
Aed6g1748 133 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Aed6g1748 133 ProSiteProfiles Zinc finger RanBP2 type profile. 98 129 IPR001876 -
Aed6g1748 133 Pfam Zn-finger in Ran binding protein and others 49 74 IPR001876 -
Aed6g1748 133 Pfam Zn-finger in Ran binding protein and others 6 32 IPR001876 -
Aed6g1748 133 Pfam Zn-finger in Ran binding protein and others 98 126 IPR001876 -
Aed6g1748 133 SUPERFAMILY Ran binding protein zinc finger-like 91 129 IPR036443 -
Aed6g1748 133 SUPERFAMILY Ran binding protein zinc finger-like 46 76 IPR036443 -
Aed6g1748 133 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Aed6g1748 133 SMART zf_4 100 126 IPR001876 -
Aed6g1748 133 SMART zf_4 50 73 IPR001876 -
Aed6g1748 133 SMART zf_4 6 30 IPR001876 -
Aed6g1748 133 Gene3D - 42 76 - -
Aed6g1748 133 Gene3D - 92 129 - -
Aed6g1748 133 Gene3D - 1 35 - -
Aed6g1748 133 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Aed6g1748 133 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1748 Aed-Chr6 21056621 21057536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1748 - - gmx:100780120 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1748 6 21056621 21057536 Aed2g0144 2 986091 987715 ECH
Aed6g1748 6 21056621 21057536 Aed6g1748 6 21056621 21057536 ECH
Aed6g1748 6 21056621 21057536 Aed10g1239 10 12497580 12498529 PCT