Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1561 ATGGAATTATCAATGGGTTCTATACATCGATTTTCGGGTGAAGGAGACGATGAAAAACAACCTAGAAAGTTGTCCAAACTTTCACGTGATCCTCAGGAAGCGGAGCCAATGGAAATGGATGTGGACATGGACATGGAGCAGTCCCAACAACCTGAAGCTGTTATGGAGCGTGACCCAAGGTGGCTAGTTACCCAGGATGTCTCAATCAGTGTTCTCCTACGTTTGTCAAGAGCCGAGTACGGCTCCGTTGCCCTACTGAACAAGAATTTCTACTCTCTCATCCAATCCGGAGAACTCTACAAGGTGAGAAGGAAAATGGGTGTTGTGGAACACTGGGTTTACTTCGCCTGCGATCTCATCAAATGGCAGGTGTACGATCCAATCAACGGCCGTTGGATGAAGCTTCCTATAATGCCTGTAATACCCAGAGGCTGCTTCATGTGTTCCAACAAAGAGTCATTGGCTGTCGGCACAGAGCTTCTCGTATTCGGAAGAGACATAGCCGCTCCAATCGTCTATTCCTACGGCCTCCTGAACAACACATGGTCCCTCGGTAACCAAATGAGTGTTCCAAGGTGCTTGTTCGCATCAGCGAGCTGCGGAGAGAAAGCAATAGTGGCTGGTGGCTGCACCATGCTGGGCCAGATCCTGAGCGTGGCTGAGCTTTACAACTCCGAAACGAAGACATGGGAGACTCTCCCCGACATGAACAAGGCTAGGAAGAGTTGCTCTGGTGTGTTCATGGATGGGAAATTCTACGCCATTGGTGGGCTTGGAGTTGATCGCAGGAGACTGACGTGTGCTGAGGAGTTTGATTTCGAGACCAAGGAGTGGCGAGTGGTGCCTAACATGCTCCCTGCGAGGAGTGATGATGAGAGTCCGATTCATGTTGAGTCACCTCCTTTGGTTGCTGTTGTGAAGAATGTGCTGTATGGTGTGGATTGTGACCAGAGGGTGATAAGGAGGTATGACAAGAACAGGAACAGTTGGGTTAGTATGGGAAGGCTTCCTGACAGAGCTTCCTCTATAAATGGCTGGGGGTTGGCTTTTCATGCATGTGGAGATCGGCTTGTTGTTATTGGTGGGGAAAATGCTCCGGGTCGGAATATGGTTGAGATTAATTCTTGGATCCCAGAAGAGGGTACTGCACCACAGTGGAACCTTCTTGCCAGAAAGCAATTACCGAGCTTTGTGTATAATTGCACTGTCATGGGATGCTGA 1221 0.493 MELSMGSIHRFSGEGDDEKQPRKLSKLSRDPQEAEPMEMDVDMDMEQSQQPEAVMERDPRWLVTQDVSISVLLRLSRAEYGSVALLNKNFYSLIQSGELYKVRRKMGVVEHWVYFACDLIKWQVYDPINGRWMKLPIMPVIPRGCFMCSNKESLAVGTELLVFGRDIAAPIVYSYGLLNNTWSLGNQMSVPRCLFASASCGEKAIVAGGCTMLGQILSVAELYNSETKTWETLPDMNKARKSCSGVFMDGKFYAIGGLGVDRRRLTCAEEFDFETKEWRVVPNMLPARSDDESPIHVESPPLVAVVKNVLYGVDCDQRVIRRYDKNRNSWVSMGRLPDRASSINGWGLAFHACGDRLVVIGGENAPGRNMVEINSWIPEEGTAPQWNLLARKQLPSFVYNCTVMGC 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1561 406 MobiDBLite consensus disorder prediction 1 40 - -
Aed6g1561 406 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 33 406 - -
Aed6g1561 406 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 33 406 - -
Aed6g1561 406 Gene3D - 100 391 IPR015915 GO:0005515
Aed6g1561 406 Pfam Kelch motif 239 284 IPR006652 GO:0005515
Aed6g1561 406 Pfam Kelch motif 191 237 IPR006652 GO:0005515
Aed6g1561 406 MobiDBLite consensus disorder prediction 11 36 - -
Aed6g1561 406 SUPERFAMILY Kelch motif 119 403 IPR015915 GO:0005515
Aed6g1561 406 SMART kelc_smart 251 298 IPR006652 GO:0005515
Aed6g1561 406 SMART kelc_smart 159 202 IPR006652 GO:0005515
Aed6g1561 406 SMART kelc_smart 203 250 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1561 Aed-Chr6 19702491 19703711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1561 66 243 EF-hand Containing Proteins AT4G39560 30.052 1.12e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1561 - - gmx:100791318 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1027 10 9056468 9057793 Aed6g1561 6 19702491 19703711 ECH
Aed6g1561 6 19702491 19703711 Aed6g1561 6 19702491 19703711 ECH
Aed11g0334 11 2752604 2754211 Aed6g1561 6 19702491 19703711 PCT