Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0334 ATGTTGGACGGTCGTTCCTGGGTTGTTCCGAGGTTGTTTTCCAGCACTTGCCAGGCAGACAACGACTGGTCTTACATGAAGTGCTTGCTGGAGTTGGACATCAAGAATGGCAAGCGCCCTATGGAGATTGATGATGTTGAGGATGAGCCCCAGCAGCCAAGGAAGTGTACTAAGAAGTTGGATTCTTGCCGTAGAGTTGAAATAGCTCGAATTTCATTTCAACGACAATCTATTGAGGCCAAGGATGTTGTTGTTCCCCCAATGATTGAGGAGAATATTGAGCCACTAATTGTTTGTCAAGGAGTTATTGGAGAAGATGATGGGGCTTTGACCGACCAACTATTGGATGAGAAAGAACAGGAGGGTGATGGTGATTTGATGGATTTTGGTGACCATCAATCTGATAAATCGCAGGAGGCTCAGCCGGGGGATTCATCAGATTTCGGTGTTGGGCTAGCTGATAAAAATCAGTTGCAGCATGATTATGAGAATTTATTGAATTTAAGTGAGCAGCACCACCACCACCACCAGCATGGTGGGGATTCTTCGGATTCCAGTTCTCTCTGGCCACGGATGAACCGAGACAGCTCAATTGCCTGTCTCAGCCGTTGTTCAAGGTCAGATTACGGTTCTCTCGCCTCGCTGAATAGAAGCTTTCGAAACATAATCCGTAGTGGTGAGCTCTATCAATGGAGAAGATTGAATGGTATCATGGAGCACTGGATTTATTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCAATTCGTCAGCGGTGGATGCATTTGCCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGTAGGTACTGAGCTACTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCACTTACAGATACAGTCTCTTGACAAACTCATGGATGCCTGGAACGAGGATGAACGCTCCAAGATGCTTGTTTAGCTCAGCAAGCCTTGGTGAGATTGCAATATTAGCTGGTGGATGTGATTTAGAGGGACACATCCTTGACTCTGCTGAATTATATAATTCTGAGACTCAAACATGGGAAACACTCCCAAGTATGAAAAAACCAAGGAAGATGTGCTCGGGGGTATTTATGGATGGAAAGTTTTATGTTATAGGGGGGATTGGGGGTAGTGATTCTAAGCTCCTCACATGTGGAGAGGAGTACAATTTACAGACTAGGACCTGGACTGAGATTCCTAACATGTCCCCCGGGCGGAGCAGTAGGGGTCCCGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCCGTTGTAAATGATGAATTGTATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTATGACAAGGAGAGAAAATTGTGGTTTACCATTGGGAGACTGCCGGAACGAGCAGTGTCGATGAATGGCTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTTATTGTCATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTCAAGGACCTCCACAGTGGGATCTACTTGCTAGAAAACGTTCTGGCAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1608 0.4627 MLDGRSWVVPRLFSSTCQADNDWSYMKCLLELDIKNGKRPMEIDDVEDEPQQPRKCTKKLDSCRRVEIARISFQRQSIEAKDVVVPPMIEENIEPLIVCQGVIGEDDGALTDQLLDEKEQEGDGDLMDFGDHQSDKSQEAQPGDSSDFGVGLADKNQLQHDYENLLNLSEQHHHHHQHGGDSSDSSSLWPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYQWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVTYRYSLLTNSWMPGTRMNAPRCLFSSASLGEIAILAGGCDLEGHILDSAELYNSETQTWETLPSMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERKLWFTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSQGPPQWDLLARKRSGNFVYNCAVMGC 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0334 535 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 535 - -
Aed11g0334 535 Gene3D - 234 516 IPR015915 GO:0005515
Aed11g0334 535 MobiDBLite consensus disorder prediction 122 152 - -
Aed11g0334 535 Pfam Kelch motif 366 413 IPR006652 GO:0005515
Aed11g0334 535 Pfam Kelch motif 318 363 IPR006652 GO:0005515
Aed11g0334 535 SUPERFAMILY Kelch motif 248 531 IPR015915 GO:0005515
Aed11g0334 535 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 535 - -
Aed11g0334 535 SMART kelc_smart 330 377 IPR006652 GO:0005515
Aed11g0334 535 SMART kelc_smart 286 329 IPR006652 GO:0005515
Aed11g0334 535 SMART kelc_smart 378 438 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0334 Aed-Chr11 2752604 2754211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0334 195 411 EF-hand Containing Proteins AT4G39560 26.267 2.59e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0334 - - gmx:100818865 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0334 11 2752604 2754211 Aed11g0334 11 2752604 2754211 ECH
Aed11g0334 11 2752604 2754211 Aed6g1561 6 19702491 19703711 PCT