Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1544 ATGAGTCGTGTTGTACAAGAGGAAACTTCCTTTGCCCTTCTTTCCCTCCCAATAAATTCTCATCCCAACAAATCATTGAAAGATGTTCTTTACAAGGACTATTCAAATCTATCTCCAGTTCACTTTCACTACCAATTCATGGACTATAATCTAGACCTCGCTTGTAAAGTAGATGAACTTGTACCTGGATTCAAGAGCCTTTTCAAATGCACCATACCTGGTTCTGGGAAGGTGGAACTTCAACACTTGACTAACTACACTGGGATTACTGGATGCATTGGATTAGAAGGAAACCTAGAAAGAGGATATGACCCTGGTCTAAACTTATCGGGCCTTGTAGGAACAAACATTCTGTCCCTTGGAGCCAATGTTGCATTTGACATACCATCAAGATCAATGAGCAATCTGAATGCTGGCTTTGGCCTCAACACTGACTTCCTTGTTGCTTCCTTGACCATGTGA 462 0.4156 MSRVVQEETSFALLSLPINSHPNKSLKDVLYKDYSNLSPVHFHYQFMDYNLDLACKVDELVPGFKSLFKCTIPGSGKVELQHLTNYTGITGCIGLEGNLERGYDPGLNLSGLVGTNILSLGANVAFDIPSRSMSNLNAGFGLNTDFLVASLTM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1544 153 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 24 153 - -
Aed6g1544 153 Gene3D Porin 16 153 IPR023614 -
Aed6g1544 153 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 24 153 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1544 Aed-Chr6 19596464 19597616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1544 K15040 - gmx:100787061 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1019 10 8945538 8949695 Aed6g1544 6 19596464 19597616 ECH
Aed3g0423 3 3008703 3013110 Aed6g1544 6 19596464 19597616 ECH
Aed6g1544 6 19596464 19597616 Aed6g1544 6 19596464 19597616 ECH