Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0423 ATGGCTAAGGGTCCTGGTCTCTACACCGACATCGGCAAGAAAGCCAAGGATCTGTTGTTCAAGGACTACCACAGTGACCAGAAGTTCACCATCACCACCTTCTCACCCACTGGAGTTGCTATTACAACATCAGGAACCAGGAAAGGTGAACTGTTTGTGGCTGATGTCAACACCCAGTTGAAGAACAAAAACATCACTACTGATATCAAAGTTGATACAGATGCTAATCTCTTTACAACTATCACTGTCAATGAACCCACTCCTGGTCTGAAGGCTATCGTTAGCTTCAAAGTTCCTGAGCAAAGGTCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTTGGGTTGACAGCAAACCCAATTGTCAACTTCTCTGGTGTCATAGGAACTAATGTTCTTGCTCTTGGTGCTGATCTTTCTTACGACACCAAAATTGGGGAGTTAACAAAATCCAATGCTGGACTGAGCTTCACCAAAGATGACTTGATTGCCTCATTGACTCTGAATGACAAAGGTGATGCTCTGAATGCTGCATATTACCATATAGTTAACCCCTTGACCAACACTGCTGTTGGTGCTGAAGTGACTCATAGATTCTCAACTAATGAGAACACTCTCACCCTTGGAACCCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTCAACAACTTTGGCAAGACAAGTGCTCTGATCCAGCATGAGTGGCGTCCCAAATCACTCTTTACCATTTCTGGTGAGGTAGATACCAAGGCCATTGAGAAGAGTGCGAAGGTGGGATTGAGTTTGGTTCTCAAACCCTAA 831 0.4465 MAKGPGLYTDIGKKAKDLLFKDYHSDQKFTITTFSPTGVAITTSGTRKGELFVADVNTQLKNKNITTDIKVDTDANLFTTITVNEPTPGLKAIVSFKVPEQRSGKVELQYLHDYAGISTSVGLTANPIVNFSGVIGTNVLALGADLSYDTKIGELTKSNAGLSFTKDDLIASLTLNDKGDALNAAYYHIVNPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKTSALIQHEWRPKSLFTISGEVDTKAIEKSAKVGLSLVLKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0423 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Aed3g0423 276 Gene3D Porin 1 275 IPR023614 -
Aed3g0423 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aed3g0423 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aed3g0423 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aed3g0423 276 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0423 Aed-Chr3 3008703 3013110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0423 K15040 - gmx:100777928 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0423 3 3008703 3013110 Aed10g1019 10 8945538 8949695 ECH
Aed3g0423 3 3008703 3013110 Aed6g1544 6 19596464 19597616 ECH
Aed3g0423 3 3008703 3013110 Aed3g0423 3 3008703 3013110 ECH