Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1019 ATGAAGCAAAAGAAGGAAAAGAAAGAGAAAAAAAACAAGGATGGGAAAGAGAAGAAGGAGAAGAACCCTGAAGATAAAAATGATCCTGCGAAATTAAAGCTAAAGCTTGAAAAACTAGACACCAAGATACAGGATCTGCAAGCTAAGAGACAAGAGATATTGAAGCAGCTTCAAGAAGCAGAACAAGATGTTCTCCACAAGGACTATGCTCAACAACCACCAATCCACTTTAACTACAGATTCCTGAATTGGAATTTAGATCTTTCCTGTCAAGAACTGGTGCATGGACTAAGGGGCCTTCTCTCATGTAACATACCTGACTCTGGGAAGTTGGAAATTCAACACTTGAGTAGATTCAGTGGGTTTAGTGCAAGCATTGGATTATCAGGAGACGCAGAAAAAGGATATAGCCCTGTTGCAAACGTCTCTGGTCATATAGGAACCAGAATTCTCACATTGGGAGCTAATGTTGTCTGTGACTTAAAGGAAAGCTCATCAGCAAGGACAACTAACAACATGAATGCTGGCTTAAGCCTCAATAGTCCCTACCTTGTTGCTGCCGCCACCTTGCAAGACGAATTTCAAACTGTGAAAGGTTCCTGTTATTTTGAAGTGAATCCCCTGACCAAGACTGCAATTGCAGCAGAGGTGATGTATGACCTTTCAGATAATGAGCCTACCAGTGTCACCATTGGCGCTCAGCACGCGTTATTTCATTGGACATTGCTAAAGGCTCGGCTTGACAGCAAGGGCAAGGTAGGCGGTCTCATTCATCAAAAGTTTGGGAGAAAATTCTCCATAACTGTCGCAGGGGAGTTGAATTTGAATGAGAAAGCTAAAGAAAGGACTCCTAAGATTGGAGTCTGTGTGGCTCTTAAATGA 882 0.424 MKQKKEKKEKKNKDGKEKKEKNPEDKNDPAKLKLKLEKLDTKIQDLQAKRQEILKQLQEAEQDVLHKDYAQQPPIHFNYRFLNWNLDLSCQELVHGLRGLLSCNIPDSGKLEIQHLSRFSGFSASIGLSGDAEKGYSPVANVSGHIGTRILTLGANVVCDLKESSSARTTNNMNAGLSLNSPYLVAAATLQDEFQTVKGSCYFEVNPLTKTAIAAEVMYDLSDNEPTSVTIGAQHALFHWTLLKARLDSKGKVGGLIHQKFGRKFSITVAGELNLNEKAKERTPKIGVCVALK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1019 293 Coils Coil 1 21 - -
Aed10g1019 293 Coils Coil 36 63 - -
Aed10g1019 293 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 62 293 - -
Aed10g1019 293 Pfam Eukaryotic porin 107 287 IPR027246 GO:0005741|GO:0055085
Aed10g1019 293 MobiDBLite consensus disorder prediction 1 33 - -
Aed10g1019 293 Gene3D Porin 55 293 IPR023614 -
Aed10g1019 293 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 62 293 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aed10g1019 293 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1019 Aed-Chr10 8945538 8949695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1019 K15040 - gmx:100784432 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1019 10 8945538 8949695 Aed6g1544 6 19596464 19597616 ECH
Aed3g0423 3 3008703 3013110 Aed10g1019 10 8945538 8949695 ECH
Aed10g1019 10 8945538 8949695 Aed10g1019 10 8945538 8949695 ECH