Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1087 ATGGAGTTGATGGGGTGTGGAAAGTTTAGGGGGTGCCTTGTTCTTGTGCTGTTTCTGTTGGTGGGTTTGGTGTGTGGAATTGGTGTTAATTGGGGAAAACAATCAACACACCCTTTGCCACCATCCACTGTGGTGAAAATGCTTAAGGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACACTGGCATTTTGGATGCTCTTAAGAAGTCTGGGATTCAGGTAATGGTTGGTATACCAAATGACATGCTCTACACACTTGCCAACAGTATGCAAGCAGCAGAGAAATGGGTTTCCAAGAATGTTTCAGCACATGTCTCATCTGGGGGAGTGGACATCAGGTATGTTGCAGTGGGAAATGAACCATTCTTGTCAACATACAACGGCACCTTTGAAAGCACAACACTTCCAGCTCTTCAAAACATCCAATCAGCCCTTGTGAAAGCCGGTTTGGGCAATCAGGTCAAAGTCACCGTCCCTCTAAACGCCGATGTCTATCAGAGCATGCAAGTACCATCCGATGGCGACTTCAGGCAAGACATCCACGACCTCATGGTGCAGATTGTCAAGTTCCTGAGCCAGAACAACGCTCCCTTCACCGTCAACATCTATCCTTTCATCAGCCTCTACAAGGACCCCAACTTCCCGGTCGACTATGCCTTCTTCAATGGCTTCCAATCTCCATTAAACGACAATGGAAGGATCTATGACAACGTCTTTGACGCCAACCATGACACTCTAGTCTGGGCGCTGCAGAAGAACGGCTTTGGGAACATGCCTATAATCGTGGGAGAAGTCGGGTGGCCTACAGATGGTGACCGAAACGCGAACCTCCAATACGCACAGCGCTTCAACCAAGGCTTCATGTCGCGCTACATTGCGGGGAAGGGGACGCCGATGAGACCGAGTCCAATGGATGCCTACTTGTTTAGTTTCATAGACGAGGATTTCAAGAGCATCCAGCCGGGCAATTTCGAAAGACACTGGGGCTTGTTTTACTATGATGGACAACCAAAGTACCAACTCAACATAGGATCAAGAACAAATGGCCTAGTACCGGCAACTGGGGTGGCATATCTGGACAAAAAGTGGTGCGTTTTGAAACCCTCAGCAAATCTCAATAGTGACCAAGTTGCACCAAGTGTGTCCTTTGCTTGTCAAAATGCAGATTGCACTAGTCTTGGATACCAAACTTCATGTGGTGGCTTAGATGCTCTCGGTAACATTTCTTATGCATTCAATAGCTACTTCCAAGTGAATGACCAGATTGATGGTGCATGCAAATTCCCTGGCCTTTCTGTTGTCACTGACAAAGATCCTTCAACTGGAGATTGCAAGTTCAGGATCATGATTCAGACAGATTCTGCTGGTTTACTACTACATGGGAATATTGGGAGAATTTGGTGTCTCAGAATAGTACTCTTTGTACTATTGTTTTTCAGTCTTATGTGA 1455 0.4619 MELMGCGKFRGCLVLVLFLLVGLVCGIGVNWGKQSTHPLPPSTVVKMLKDNGIQKVKLFDADTGILDALKKSGIQVMVGIPNDMLYTLANSMQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALVKAGLGNQVKVTVPLNADVYQSMQVPSDGDFRQDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYKDPNFPVDYAFFNGFQSPLNDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPSPMDAYLFSFIDEDFKSIQPGNFERHWGLFYYDGQPKYQLNIGSRTNGLVPATGVAYLDKKWCVLKPSANLNSDQVAPSVSFACQNADCTSLGYQTSCGGLDALGNISYAFNSYFQVNDQIDGACKFPGLSVVTDKDPSTGDCKFRIMIQTDSAGLLLHGNIGRIWCLRIVLFVLLFFSLM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1087 484 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Aed6g1087 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 462 IPR044965 GO:0004553|GO:0005975
Aed6g1087 484 Pfam X8 domain 364 433 IPR012946 -
Aed6g1087 484 Gene3D Glycosidases 26 351 - -
Aed6g1087 484 SMART X8_cls 364 448 IPR012946 -
Aed6g1087 484 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Aed6g1087 484 Gene3D - 360 457 - -
Aed6g1087 484 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
Aed6g1087 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 13 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1087 Aed-Chr6 15358434 15362837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1087 24 479 Glycoside Hydrolase AT4G31140 69.697 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1087 K19893 - gmx:100790297 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1087 6 15358434 15362837 Aed10g0609 10 4871630 4873634 PCT
Aed7g2401 7 25959227 25963364 Aed6g1087 6 15358434 15362837 PCT