Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2401 ATGGGGTTGATGGGGGGTGGAAAGTTTGTTGCTTTATTTGCTGTGTTGGTTTTTAGTGTGGGATCAGTGAGAGTGAGTGGGATTGGTGTGAATTGGGGGACACAGTCGACACACCCTTTGTCACCGTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGAATACAGGTCATGGTGGGGATTCCCAATGACATGCTTTATACGCTTGCTAACAGTGTCGACGCTGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACACGTCTCTTCTGGAGGAGTGGACATCAGGACTGTGTTATCTGATAAAAGGCTTTTGAGGAGTGGCGGTACTGTAAATGTTAGAAGGAAACATTGCAACTGGAGAGGAAATTGCTCATCGTCTAATCTTTCACATCTTCTACTGCCTAATATATTCCTCTTAATTCTCATATATGCTGATCTGGGAAAGCTCCACTCATCACTACTTGGAATGAAATTATGCCCCTTTTTTAAGAATCACATGCAATCCTTGTTCTCGTATGCAATTAATGGAGAAGTTTCCCAAACATCACTAGATTTGGAAGTGGGGAATGAACCATTCTTGTCAACATACAACGGTTCCTTCGAAGCCACAACTCTTCCAGCACTCCAAAACATCCAGGCAGCTCTCACAAAATCCGGTTTAAGCAACCGTGTCAAAGTCACCTGCCCCTTAAACGCCGACGTATACCAAAGCTCCTCAGAAAAGCCATCCGATGGTGGTTTCAGGCCGGACATCAACAATGTCATGGTGCAGATTGTCAAGTTCCTGAATGACAATGGAGCTCCCTTCACGGTGAACATCTACCCTTTCATCAGCCTCTACACAGACCCCAATTTCCCTGTTGACTATGCCTTCTTCAACGGCTACCAGCCTGCCATAAACGACAACGGAAGAGCCTACGACAACGTGTTTGACGCCAACCACGACACTCTAGTGTGGGCACTGCAGAAGAATGGCTACGGAAACCTGCCTATAATCGTGGGAGAAATCGGGTGGCCAACGGATGGGGACAGAAATGCAAACCTTCAATATGCACAACGTTTCAACCAAGGCTTCATGTCACGTTACATGTCTGGAAAGGGTACCCCAATGAGGCCTAGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGGAACTTTGAACGTCATTGGGGGATGTTTTACTTAGATGGGCAACCCAAGTACCAACTTAACCTTGGTTCAGCACGAGGTTTAGTAGGTGCTAGAGTTGATCATTTGTCCAAAAAGTGGTGTGTTTTGAAACCCTCAGCAAACCTTAATGATGACCAACTTGCACCTAGTGTGGCCTATGCATGTCAAAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCGTGTGGCAATTTGGATGTGCATGGCAACATTTCTTATGCGTTTAATAGCTACTATCAGATTAATGACCAGATGGACAGTGCATGCAAATTCCCGGGGCTTTCCATGACCACTGTCAAGGATCCTTCGGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCGGAGCTACGTGGTGGAAAAGTTGGATATCTAACAACAGTGCTGTGTTTTTTTGTACTTTTGATGTTCTGTAATCTCTGGTTTTGA 1719 0.4497 MGLMGGGKFVALFAVLVFSVGSVRVSGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVDAAEKWVSKNVSKHVSSGGVDIRTVLSDKRLLRSGGTVNVRRKHCNWRGNCSSSNLSHLLLPNIFLLILIYADLGKLHSSLLGMKLCPFFKNHMQSLFSYAINGEVSQTSLDLEVGNEPFLSTYNGSFEATTLPALQNIQAALTKSGLSNRVKVTCPLNADVYQSSSEKPSDGGFRPDINNVMVQIVKFLNDNGAPFTVNIYPFISLYTDPNFPVDYAFFNGYQPAINDNGRAYDNVFDANHDTLVWALQKNGYGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPSPIDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGQPKYQLNLGSARGLVGARVDHLSKKWCVLKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQINDQMDSACKFPGLSMTTVKDPSVGDCKFRIMIQTDSAELRGGKVGYLTTVLCFFVLLMFCNLWF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2401 572 SUPERFAMILY (Trans)glycosidases 206 434 IPR017853 -
Aed7g2401 572 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 200 545 - -
Aed7g2401 572 Pfam Glycosyl hydrolases family 17 28 110 IPR000490 GO:0004553|GO:0005975
Aed7g2401 572 Pfam Glycosyl hydrolases family 17 208 434 IPR000490 GO:0004553|GO:0005975
Aed7g2401 572 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 118 IPR044965 GO:0004553|GO:0005975
Aed7g2401 572 Gene3D - 448 546 - -
Aed7g2401 572 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 200 545 IPR044965 GO:0004553|GO:0005975
Aed7g2401 572 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 14 118 - -
Aed7g2401 572 Pfam X8 domain 452 522 IPR012946 -
Aed7g2401 572 SMART X8_cls 452 536 IPR012946 -
Aed7g2401 572 ProSitePatterns Glycosyl hydrolases family 17 signature. 350 363 IPR000490 GO:0004553|GO:0005975
Aed7g2401 572 SUPERFAMILY (Trans)glycosidases 28 119 IPR017853 -
Aed7g2401 572 Gene3D Glycosidases 28 159 - -
Aed7g2401 572 Gene3D Glycosidases 201 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2401 Aed-Chr7 25959227 25963364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2401 192 568 Glycoside Hydrolase AT4G31140 65.879 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2401 K19893 - gmx:100796552 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2401 7 25959227 25963364 Aed6g1087 6 15358434 15362837 PCT