Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0609 ATGGCTCCACCAAAGTTATTCATGTGGGGTCTTGGTTTGATATTGGTCGTAGCTCATTACCAAGGTGCCCAAGGGGAAGAGTCTTCTATACCAGGTCTTGGTATCAATTGGGGTGCATTAGCATCTCACCCTTTGAATCCTAACGTTGTGGTAAACATGTTGAAGGACAATGGGATCAAGAAGGTTAAAATGTTCGATGCTGATTCTTCGACCGTGGGTGCTTTGTCTGGCACAGACATTGAAGTCATTGTCGGAATTCCTAATGATCAATTGAGTAAATTTGCTGCAAGTAGAGGAGATGCAGAACATTGGGTCAAAGAAAATCTCACCAAACATATTCATAGTCATCATGGCAGCGTCAACATCAGGTACGTATCTGTTGGAAATGAGCCATTCATGAAAGATTACAAGGGTTTGTATGTGCAGACCACATTCCCAGCAATGCAAAACATTCAAAGGGCCATAGATAAGGCTGGTCTTGGAGACACAGTGAAGGTGACAACAGCTTTGAATGCTGATGTTTACGAGTCTGCATCAGACAAGCCATCAGATGGAGATTTTCGAAGCGACATTCGAGATGCCATAATACAAATACTGAGTTTCCTTCACGAGAGAAACTCGCCATTTATTGTGAACATATACCCTTTTCTCAGTCTCTACCAGAACACCAATTTTCCTGTTGAGTTCGCATTCTTTGATGGTCAAGGCCGAACAATTCAAGACAAGGATGCACAATACAGCAATGTGTATGATGCGAATTTGGACACACTCGTTTGGTCTTTGAAAAAAGCTGGCTACCCTGACTTGAGAATCGTGGTTGGTGAAATTGGATGGCCAACTGATGGAAACAAAAATGGTAACACCAACAATGCAAAGAGGTTCTATAAAGGGCTTCTCAAGAAAATGGCAAATAAGAAAGGAACTCCTCTTCGCCCCGGAGCCATGGAGATGTATTTGTTTTCCCTTACCGATGAGAACTTGAAGAGCGTTGAGCCTGGACACTTTGAGCGCCATTGGGGGATTTTTCGCTACGACGGAAGGCCGAAGTTTCCTCTTGATTTCTCTGGTAAAGGAGAGGAGAAATGGCCGGTGGGAGCCAAAGGTGTTGTGTACCAAGAACATAAGTGGTGTGTTCTGAGTGGTGATGTTAAGAACTTGAGTTTGGTGCCAAGTGCTTTGGACTATGCTTGTGCTGGTGCTGATTGCTCTAGCTTGGGATATGGTTGCTCTTGTGACAATTTGGATTTGGCTGGCAATGCTTCTTTTGCTTTCAACCAGTATTTTCAGACAAGGGACCAGAGCGTTGAGGCTTGTGATTTCAATGGATTGGCCACTATTGTGGATCAGGATCCATCCAAGGGAACTTGCTTGTTCCCTGTTGAAATTGAGAGCAGTGGTGACATTGTTAGAGCAATATGTACTATTGCAAGCCTTTTGATTGGATTTGCATTGTTTTTCATATAA 1464 0.4337 MAPPKLFMWGLGLILVVAHYQGAQGEESSIPGLGINWGALASHPLNPNVVVNMLKDNGIKKVKMFDADSSTVGALSGTDIEVIVGIPNDQLSKFAASRGDAEHWVKENLTKHIHSHHGSVNIRYVSVGNEPFMKDYKGLYVQTTFPAMQNIQRAIDKAGLGDTVKVTTALNADVYESASDKPSDGDFRSDIRDAIIQILSFLHERNSPFIVNIYPFLSLYQNTNFPVEFAFFDGQGRTIQDKDAQYSNVYDANLDTLVWSLKKAGYPDLRIVVGEIGWPTDGNKNGNTNNAKRFYKGLLKKMANKKGTPLRPGAMEMYLFSLTDENLKSVEPGHFERHWGIFRYDGRPKFPLDFSGKGEEKWPVGAKGVVYQEHKWCVLSGDVKNLSLVPSALDYACAGADCSSLGYGCSCDNLDLAGNASFAFNQYFQTRDQSVEACDFNGLATIVDQDPSKGTCLFPVEIESSGDIVRAICTIASLLIGFALFFI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0609 487 Pfam Glycosyl hydrolases family 17 33 354 IPR000490 GO:0004553|GO:0005975
Aed10g0609 487 Gene3D Glycosidases 32 361 - -
Aed10g0609 487 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 473 IPR044965 GO:0004553|GO:0005975
Aed10g0609 487 SUPERFAMILY (Trans)glycosidases 33 354 IPR017853 -
Aed10g0609 487 SMART X8_cls 375 458 IPR012946 -
Aed10g0609 487 ProSitePatterns Glycosyl hydrolases family 17 signature. 269 282 IPR000490 GO:0004553|GO:0005975
Aed10g0609 487 Gene3D - 369 465 - -
Aed10g0609 487 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 24 473 - -
Aed10g0609 487 Pfam X8 domain 375 445 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0609 Aed-Chr10 4871630 4873634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0609 28 470 Miscellaneous Gene Families AT5G64790 55.305 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0609 - - gmx:100794658 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0609 10 4871630 4873634 Aed10g0609 10 4871630 4873634 ECH
Aed6g1087 6 15358434 15362837 Aed10g0609 10 4871630 4873634 PCT