Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1205 ATGGCAACGGATTCTTCTAATGGTAATGGACATCACCAGACAACAACAAAGCAACCTCCTTCACCATCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGATTACTGGAGGAGCTGGATTCATTGGGTCTCATTTGGTTGACAGATTGATGGCAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACTGGATCCAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTCAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGTGCACCCCCAACCTGAAAGTTATTGGGGCAATGTCAACCCTATTGGAGTTCGTAGTTGTTATGATGAAGGGAAACGGGTGGCTGAGACTTTGATGTTTGATTACCATAGGCAGCATGGGATTGAAATACGGATTGCAAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCTCAAGCACTTAGGGGGGAACCATTGACAGTTCAATGTCCGGGAACACAAACTCGAAGTTTCTGCTATGTGACTGACCTGGTTGATGGCCTTATTCGTCTCATGGAAGGATCAAACACCGGGCCAATCAACCTCGGAAACCCAGGAGAATTTACAATGACAGAACTTGCTGAGACAGTGAAAGAGCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCCGACGATCCGCGACAAAGAAAACCAGACATCACAAAAGCAAAGGAATTGTTGGGCTGGGAGCCAAAGGTCAAGTTGCGGGATGGTCTTCCTCTTATGGAAGAGAATTTCCGTCTCAGGCTTGGAGTTGCCAAAAAGAATTAA 1047 0.4422 MATDSSNGNGHHQTTTKQPPSPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMANEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVTDLVDGLIRLMEGSNTGPINLGNPGEFTMTELAETVKELINPGVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEENFRLRLGVAKKN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1205 348 MobiDBLite consensus disorder prediction 1 24 - -
Aed1g1205 348 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 348 - -
Aed1g1205 348 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 348 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aed1g1205 348 Pfam GDP-mannose 4,6 dehydratase 38 332 IPR016040 -
Aed1g1205 348 CDD UGD_SDR_e 35 339 - -
Aed1g1205 348 Gene3D - 163 342 - -
Aed1g1205 348 Gene3D - 32 162 - -
Aed1g1205 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 339 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1205 Aed-Chr1 11631512 11635378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1205 32 347 Miscellaneous Gene Families AT1G02000 23.932 9.09e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1205 K08678 - gmx:100790835 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1205 1 11631512 11635378 Aed5g0414 5 2935396 2938790 PCT
Aed5g0413 5 2930244 2934399 Aed1g1205 1 11631512 11635378 PCT