Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0414 ATGGCAGCGAATTCTACTGATGCAGATCAAGTTAAATCACCGAAGCAACCTCCCGAGCCATCTCCCTTGCGTTTTGCCAAATTCTTTCAGGCAAACATGAGAATCTTGATCACGGGAGGAGCTGGATTCATTGGTTCTCACCTGGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTGGCTGTATGGTATTCTCAGGAAACATTAACAGTGATACATAAGTATATCACCGAAACTTTGATGATTGAGGTGGATCAGATCTACCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTTATCGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGTGCAAGGATTTTACTTACGTCAACATCGGAGGTATATGGGGATCCTCTTGTGCACCCCCAACCGGAAAGCTATTGGGGCAATGTGAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGAAATACGTGTTGCAAGAATCTTTAACACATATGGGCCCCGCATGAATATTGATGATGGACGGGTTGTCAGCAACTTCCTTGCTCAAGCCATTCGTGGTGAACCCTTAACTGTCCAGGCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTATATATATATATATATATATATATTTCCCATCTGCATCTTTGTTTCATCGAGTTACTATTAGTCTCTGTCTTTGGTAAGCTGATTATGTTTTATTGTGATAGGTTGATGGCCTTATCCGTCTCATGGGAGGAACTGACACTGGACCAATCAACCTTGGAAATCCAGGTTAGATTTTTTCTATTGCAAGGCCAGCTTTTAAGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGGTTATTAATCCAGATGTGGTGATAAAGGTAGTGGATAACACTCCTGATGACCCGAGACAGAGAAAACCAGACATAACAAAAGCAATGGAATGGCTTGACTGGGAACCAAAGGTTCAGCTGCGAGATGGCCTTCCTCTTATGGAACAGGATTTCCGTTCGAGGCTTGGAGTTGAGAAAAAATAA 1134 0.4215 MAANSTDADQVKSPKQPPEPSPLRFAKFFQANMRILITGGAGFIGSHLVDRLMENEKNEVAVWYSQETLTVIHKYITETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRVARIFNTYGPRMNIDDGRVVSNFLAQAIRGEPLTVQAPGTQTRSFCYVSDLVYIYIYIYISHLHLCFIELLLVSVFGKLIMFYCDRLMALSVSWEELTLDQSTLEIQVRFFLLQGQLLSEFTMLELAETVKEVINPDVVIKVVDNTPDDPRQRKPDITKAMEWLDWEPKVQLRDGLPLMEQDFRSRLGVEKK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0414 377 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 304 377 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aed5g0414 377 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 241 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aed5g0414 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 371 IPR036291 -
Aed5g0414 377 Gene3D - 32 249 - -
Aed5g0414 377 Pfam NAD dependent epimerase/dehydratase family 35 243 IPR001509 -
Aed5g0414 377 Gene3D - 296 374 - -
Aed5g0414 377 MobiDBLite consensus disorder prediction 1 21 - -
Aed5g0414 377 CDD UGD_SDR_e 33 369 - -
Aed5g0414 377 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 304 377 - -
Aed5g0414 377 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0414 Aed-Chr5 2935396 2938790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0414 32 237 Miscellaneous Gene Families AT3G23820 25.532 2.44e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0414 K08678 - gmx:100818771 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0414 5 2935396 2938790 Aed5g0414 5 2935396 2938790 ECH
Aed1g1205 1 11631512 11635378 Aed5g0414 5 2935396 2938790 PCT