Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0413 ATGGCAACGAATTCTTCTAATGGAGCAACAAAGCAACCTCCTTTGCCATCTCCCTTGCGTTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTCTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACTTAGTTGACAAATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTTCTTCACTGGATCTAAAGACAACCTTAAGAAATGGATTGGCCATCCAAGATTTGAGCTAATTCGTCATGATGTCACTGAGCAATTGCTGGTAGAGGTTGATCAAATCTATCATCTTGCATGCCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACAAATGTGATTGGAACTTTGAACATGCTTGGGCTCGCTAAGCGCGTGGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGGGACCCTCTTGTGCACCCACAACCAGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGTTATGATGAGGGCAAGCGTGTTGCAGAAACTTTGATGTTTGATTACCATAGGCAGCATGGAATAGAAATACGCATTGCAAGAATCTTTAACACATACGGACCACGAATGAATATTGATGATGGGCGTGTGGTCAGCAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTAACTGTGCAAGTTCCAGGAACTCAAACTCGCAGCTTCTGCTATGTCTCTGACATGGTTAATGGACTTATAAGTCTAATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTGAATTTACAATGATTGAACTCGCTGAGAATGTGAAAGAGCTTATTAATCCAGCAGTGGAGATAAAGATGGTTGAGAACACTCCAGACGATCCTCGTCAGAGAAAACCAGACATTACAAAAGCAAAGGAATTGCTGGAATGGGAACCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTGAGGCTTGGCGTTGCCAAGAACAACTAA 1029 0.4237 MATNSSNGATKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVNGLISLMEGENTGPINIGNPGEFTMIELAENVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLEWEPKVKLRDGLPLMEEDFRLRLGVAKNN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0413 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aed5g0413 342 CDD UGD_SDR_e 29 333 - -
Aed5g0413 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
Aed5g0413 342 Gene3D - 28 335 - -
Aed5g0413 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 333 IPR036291 -
Aed5g0413 342 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0413 Aed-Chr5 2930244 2934399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0413 31 325 Miscellaneous Gene Families AT4G00110 23.939 4.47e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0413 K08678 - gmx:100819843 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0413 5 2930244 2934399 Aed5g0413 5 2930244 2934399 ECH
Aed5g0413 5 2930244 2934399 Aed1g1205 1 11631512 11635378 PCT