Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01190 ATGGCTGAGAAGCAGAAACCGTCTTCATCAACTTCATCAGGGGATTGGAGGAGAATACCACTTTGCACTTTCTTTAAGGATACCAGACAAGTTTTCAAATTAGATAGTCTTGGTCGTGAAATATTGTCTATTGCACTGCCTGCAGCAATGGCTTTGACAGCAGACCCCATAGCTTCACTGGTTGACACAGCATTCATAGGCCGAATTGGTGCAGTGGAGCTTGCTGCTGTAGGAGTTTCAATAGCTCTCTTCAATCAAGTGTCAAGGATTGCAATATTCCCCCTTGTCAGTTGCACAACCTCTTTTGTGGCTGAAGAAGACAGCATCACCGGAGCAAGCCCTCCAGTAGATGAAAGCGAAACCATGGAAGCAGGTCCACCCTCTGATGCTGAAACCAAAGAGTTCCTACCCCAGAAAGGTACCGTTGTTGGAAGTATTCAGAAACTAGATTTGGCTGGTGAAAGCTTTGACACAGTTGAGGAGGCGCAACAAAAGAAAAGGCATATCCCTTCGGCTTCATCTGCAATATTTATCGGCGGCATCCTTGGCCTCATCCAGGCAGTACTACTTATATCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTAGCTTCTGACTCTCCTATGCTACACCCTGCGCAACGGTACCTGACACTGCGGTCCCTTGGTGCTCCTGCGGTTCTTCTTTCGTTGGCGATGCAGGGAGTCTTCAGAGGATTTAAGGACACTAGAACTCCTCTATATGCTACTGTGGCTGGAGATGTTACCAATATAGCATTAGATCCTTTATTCATGTTTGTATTTCGCTTAGGCGTCAGCGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTTATTTCAGTTATACTTCTATGGAGGTTGATGGAACAAGTTGATCTTATTCCTCCAAGCATCAAGCATTTGAGATTTGACCGATTTCTTAGAAATGGTTTCCTATTGTTAATGAGAGTCATTGCTGTAACATTCTGTGTGACGCTGGCCGCGTCTTTAGCTGCACGCCACGGATCAACATCCATGGCAGCTTTTCAAGTGTGCTTACAGATTTGGCTGGCAGTGTCTCTTCTAGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCGGGTGCATTTGCTAATAAGGACTATGAGAAGGCCACAGCAACTGCTTCTCGAGTATTGCAGATGGGATTGGTTCTAGGTGTGGGACTTGCATTTATTCTTGGAACAGGATTGCACTTTGGAGCTAAGCTGTTTACTGAAGATGTTAAAGTCCTCCATTTCATTAGAATGGGGATACCGTTTGTAGCATTAACACAACCCCTGAACTCATTGGCATTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTCGCATATTCAGCCTTCTCTATGATTGTGGTGGCCATCATTAGCATAGTATGTTTACTTATCATGTCATCTGCTGGTGGTTTCATTGGAATATGGATCGCTTTGACAATTTATATGTCTCTTAGGGCCTTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGGAATTCCTATGGAGATGA 1563 0.4491 MAEKQKPSSSTSSGDWRRIPLCTFFKDTRQVFKLDSLGREILSIALPAAMALTADPIASLVDTAFIGRIGAVELAAVGVSIALFNQVSRIAIFPLVSCTTSFVAEEDSITGASPPVDESETMEAGPPSDAETKEFLPQKGTVVGSIQKLDLAGESFDTVEEAQQKKRHIPSASSAIFIGGILGLIQAVLLISAAKPLLNFMGVASDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLMEQVDLIPPSIKHLRFDRFLRNGFLLLMRVIAVTFCVTLAASLAARHGSTSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFANKDYEKATATASRVLQMGLVLGVGLAFILGTGLHFGAKLFTEDVKVLHFIRMGIPFVALTQPLNSLAFVFDGVNFGASDFAYSAFSMIVVAIISIVCLLIMSSAGGFIGIWIALTIYMSLRAFAGFLRIGTGSGPWEFLWR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01190 520 PANTHER PROTEIN DETOXIFICATION 43 15 518 - -
Adu08g01190 520 TIGRFAM matE: MATE efflux family protein 47 490 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu08g01190 520 CDD MATE_DinF_like 37 510 IPR044644 -
Adu08g01190 520 Pfam MatE 166 263 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu08g01190 520 Pfam MatE 322 475 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu08g01190 520 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 15 518 IPR044644 -
Adu08g01190 520 MobiDBLite consensus disorder prediction 109 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01190 Adu-Chr8 20998488 21003024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01190 K03327 - gmx:100780165 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01190 08 20998488 21003024 Adu08g01190 08 20998488 21003024 ECH
Adu02g01545 02 64063629 64070755 Adu08g01190 08 20998488 21003024 ECH
Adu08g01190 08 20998488 21003024 Adu03g00328 03 2937253 2940282 PCT