Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01545 ATGAGCTTTCATATGTTATTTTCTGGCATAAGGAACGCCTTTAGGAAGGATGAACTAGGCCTGGAAATAATGCATATATCACTGCCTACCACTCTTGCTTTGGCTGCAGATCCTATTGCTTCTCTGATTGATACTGCATTCATCGGACACATAGGCCCTGTGGAGCTTGCTGCAGTGGGGGTATCAATTGCAATTTTTAATCAAATCTCAAAAATAGCAATAATTCCTCTGGTCAGTGTTACAACCTCGTTGGTTGCCGAGGAAGATGCCGTCGATAAATTACAAAATCAACCATCAGAAACAGAAATGCTGATCCATACCTCTTCTGTGACCGAGGAAACAAAATTGGAAGTGGAACAAATAGATCCTGAATGCAGTACATCATCAAGAAGTGTTAATAGAGTAGCTAAACTTGGCCATGACAAAAGCTATATTCCATCAGCTTCATCAGCAATAGTTATCGGTGCCATTCTCGGCGTCTTACAAGCTCTCTCTCTCATTTTTACAGCCAGACCAATCTTGAATTACATGGGAGTTGATTATAATTCTCCGATGTTGAAGCCGGCACAGCAATACTTGACTCTGAGGTCATTTGGTGCACCAGTTGTGATACTTTCTATGGCCATGCAAGGAGTTTTTCGAGGAATCAAAGATACGAAAACACCTTTATATGCTACAATTGTGGGAGATGTAACAAATATCATTTTAGATCCATTGCTTATCTTCGTACTCCGGTTGGGAGTCAGCGGTGCAGCAATCGCACACATTATCTCCCAGTACTTGATTTCCTTGGTGTTGTTGTGGAGTTTAATGAAGCAAGTTGATCTAATGCCTCCAAGTATCCAAGATTTTCAATTTGGGAAGATTCTAAAAAATGGGTTTCTGCTATTGTTGAAAGTTACAGCAGTGACATTCTGTGTGACACTGTCAGCATCCCTTGCAGCAAGACAAGGATCAATAACCATGGCCGCCTTCCAAATCTGCTTACAGATTTGGATGGCGACCTCTTTGCTTGCTGATGGATTAGCTGTTTCTGCTCAAGCTATTCTTGCAAGTGCATTTGCGCAAAGGGATTACCATAAAGTGATCACATCGGCTTCGCGTGTTCTTCAGCTTGGGCTGATTCTGGGGCTGGTTCTCTCATTCCTTCTCTTTAGTCTGCTCCCTTTTGCTTCTAAGTTATTTACAAACGACGTCGCTGTTCTGCATCTTATTGGTATTGGTATTCCGTATGTTGCAGCCACTCAACCCCTCAATTCACTAGCATTTGTTTTTGACGGAGTAAACTACGGAGCTTCGGATTTCATATACTCTGCTTACTCAATGATTTTGGTGGCATTGGTGAGCATATTTAGCTTATATATGTTATCCTCAAGCTATGGCTTTAGTGGTATCTGGATTGCTTTGTCTATTTACATGAGCCTCAGGACATTTGCTGGCTTTTGGAGGATAGGTACTAGATCAGGACCTTGGCATTTCCTGAAGGAAAACTATGCACTACTGCAATAG 1509 0.4182 MSFHMLFSGIRNAFRKDELGLEIMHISLPTTLALAADPIASLIDTAFIGHIGPVELAAVGVSIAIFNQISKIAIIPLVSVTTSLVAEEDAVDKLQNQPSETEMLIHTSSVTEETKLEVEQIDPECSTSSRSVNRVAKLGHDKSYIPSASSAIVIGAILGVLQALSLIFTARPILNYMGVDYNSPMLKPAQQYLTLRSFGAPVVILSMAMQGVFRGIKDTKTPLYATIVGDVTNIILDPLLIFVLRLGVSGAAIAHIISQYLISLVLLWSLMKQVDLMPPSIQDFQFGKILKNGFLLLLKVTAVTFCVTLSASLAARQGSITMAAFQICLQIWMATSLLADGLAVSAQAILASAFAQRDYHKVITSASRVLQLGLILGLVLSFLLFSLLPFASKLFTNDVAVLHLIGIGIPYVAATQPLNSLAFVFDGVNYGASDFIYSAYSMILVALVSIFSLYMLSSSYGFSGIWIALSIYMSLRTFAGFWRIGTRSGPWHFLKENYALLQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01545 502 TIGRFAM matE: MATE efflux family protein 29 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu02g01545 502 Pfam MatE 148 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu02g01545 502 Pfam MatE 298 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu02g01545 502 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 4 495 IPR044644 -
Adu02g01545 502 PANTHER PROTEIN DETOXIFICATION 4 495 - -
Adu02g01545 502 CDD MATE_DinF_like 22 486 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01545 Adu-Chr2 64063629 64070755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01545 K03327 - gmx:100810327 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01545 02 64063629 64070755 Adu02g01545 02 64063629 64070755 ECH
Adu02g01545 02 64063629 64070755 Adu08g01190 08 20998488 21003024 ECH