Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00328 ATGGCTGACAAACTCATTTCAATACAAGATGGGAGCAGAATTCCAATTTGCAGTTTATTTAGGGATACCAGACTTGTTTTCAAAGCAGACAACCTTGGTTGGGAAATATTGTCAATTGCAGTGCCTTCTGCTATGGCTTTGACAGCTGATCCTATTGCTTCACTGGTTGACACAGCATTCATTGGCCGAATAGGTGCAGTGGAGCTTGCAGCTGTAGGAGTATCCATAGCTCTCTTCAATCAAATATCAAGGATTGCAATTTTCCCACTCGTCAGTGTGACTACTTCTTTTGTGGCTGAGGAAGATGCCCTTACAGCAGCCAGCCCTCTGGTAGAGGATGGTGAATCCTTGGAAGAAGGTTCCATTCTGAAAGCTGAAATCAATGAACTTATACCAGATAAAGATGTTCAGAAACCAAATTTGATCCATATGGACTCAAATGTAGTTAAGGTTGAGCATAAGAGAAGGCATATCCCTTCTGCATCATCTGCATTGGTTATTGGTGGTATTCTTGGCCTTTTCCAGGCAATATTCCTCATATTTGCAGCAAAACCTTTATTGCACTTCATGGGAGTAAATTATGACTCTCCCATGCTCAAACCTGCACAGAACTACCTGACATTGAGATCTCTTGGCGCGCCGGCTGTTCTTCTCTCGTTAGCAATGCAGGGAGTCTTCCGAGGATTTAAAGACACTAAAACACCTCTATGTGCAACTTTGGCAGGAGATTTGACCAACATAGCACTGGATCCTTTGTTCATGTTTGTATTCCGCTTAGGTGTTAGTGGTGCAGCCATTGCTCATGTTATATCTCAGTACCTAATTTCTGTAATACTCCTGTGGAAATTGATGCAAAAAGTTGATCTTATGCCTCCCAGCATCAAGCATCTGCAGTTTGATCGATTTCTCAAAAATGGTTTTCTGTTGTTAATGAGAGTAACTGCTGTAACATTCTGTGTCACTCTGGCCACCTCACTAGCTGCACGCCAGGGATCAAAATCTATGGCTGCATTTCAAGTCTGCCTGCAGATTTGGCTGGCAGTATCTCTTCTTGCCGATGGTCTTGCTGTTGCTGGGCAGGCAATTCTTGCAGGCGCATTTGCTGCCAAGGACTATGACAAGGCCACTGAGACTGCGGCTCGAGTATTACAGATGGGTTTGGTTCTGGGATTGGCTCTTGCATTCATTCTTGGTGCAGGACTTCCTTTTGGAGCTAAACTATTTACAAGAGATGTTGATGTCCTCCACCTCATAAAAATTGGAATACCTTTTGTTGCAGCCACCCAACCCATCAATGCTTTGGCATTTGTATTTGATGGTATTAACTTTGGTGCATCTGACTTTGCATATTCAGCATTCTCTTTGCTTATAGTGGCAGTTGTCAGCATCATTTGCCTACTATTTTTATCAGCATCATTCATAGGAATTTGGGTTGCTTTGACCATCTATATGGGTCTTAGAGCATTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGAAGATCCTTAGGAAGTGA 1524 0.4311 MADKLISIQDGSRIPICSLFRDTRLVFKADNLGWEILSIAVPSAMALTADPIASLVDTAFIGRIGAVELAAVGVSIALFNQISRIAIFPLVSVTTSFVAEEDALTAASPLVEDGESLEEGSILKAEINELIPDKDVQKPNLIHMDSNVVKVEHKRRHIPSASSALVIGGILGLFQAIFLIFAAKPLLHFMGVNYDSPMLKPAQNYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLCATLAGDLTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWKLMQKVDLMPPSIKHLQFDRFLKNGFLLLMRVTAVTFCVTLATSLAARQGSKSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFAAKDYDKATETAARVLQMGLVLGLALAFILGAGLPFGAKLFTRDVDVLHLIKIGIPFVAATQPINALAFVFDGINFGASDFAYSAFSLLIVAVVSIICLLFLSASFIGIWVALTIYMGLRAFAGFLRIGTGSGPWKILRK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00328 507 TIGRFAM matE: MATE efflux family protein 42 477 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g00328 507 Pfam MatE 160 252 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g00328 507 Pfam MatE 314 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g00328 507 CDD MATE_DinF_like 32 497 IPR044644 -
Adu03g00328 507 PANTHER PROTEIN DETOXIFICATION 43 10 115 - -
Adu03g00328 507 PANTHER PROTEIN DETOXIFICATION 43 143 506 - -
Adu03g00328 507 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 10 115 IPR044644 -
Adu03g00328 507 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 143 506 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00328 Adu-Chr3 2937253 2940282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00328 K03327 - gmx:100780165 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01190 08 20998488 21003024 Adu03g00328 03 2937253 2940282 PCT