Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00774 ATGGAGAATTATCAGCAAGGAAAGGAGATTGAGAAGTTCACATGGGTAATTGAAAATTTCTCAAAGAAGAACACCAAGAAGCTACGATCCAAGTCCTTCCAAGTTGGTGGTTGTAAATGGCAGATACATGTGCATCGAATAGAAAAAGCAAAAGGTATGGAGTATTTATCATTGTATTTGAAGGTTGGAGGTTCTGTACCATCATTTGGATGGAGCAAATATGCATATTTCAGTTTAGCTCTAATTAATCATATGGATCCCCAAAAGTCAGTTGTAAGAGAGACACAACAGAAGTTCAATGCTGGATACCGTAGCTGGGGTTCAAGCTTTGTGGCTCTGAATGACTTCTATGATCCTAAACAAGGATATCTCCTCAACAATGTTTGCATCATTGAAGTCCGAATCTCTGTCTCCGATGTTGCATTTGACACCAACATTTTTAACATTAATAATAACAATAATGTCTCATCATCTACTCATCACTCTAATAATCAAACTTCAAATGAGACACTGAGCCGTTCAACTTCAACCACAACCCAAGAAGATGATGTTAATGGAATAACAACATTACAACCTAATTCAGATGATGTAGTACACTATGTGCCTACAGCACCACCTCTATTATATCCTACTATTATATGTGATGATGAACCTTTAGTAGTGCCCTTAAACACTACTCTTAGTGAGATTCTAGATGTGAAAAGCTTAGGAGAAGAAGAAAAAGCTTATGTTCCCTTGTTGGAAGAGGTATGTTCATGGCACCCTTCGCTGATCCAAAGCCAAATGAGAAAGAGTCCGAAATTCATTCAATGGGCATTCATAGCATTAGGTCAAGTTCTACATTTCCTCAAGACAACAAAGGCAAAGGACATGGATGAGAATGCATTCAACAAACTCCAATGTCTTTGGGAGGAGCTTCAGTTGTTCGGATTCGAGCTGAGTTGGTTGGAGCCGCATGTTGAATCTGCATTGGACATGAAAGGCTACTTGGAAAGAGCGAAGACCCTAAAGGAGAATGTGATTGGTTTGGAGATTGAGATGAAGATGCTCAGAGCCAAAATGGCTGTGGCAGAAATCGATCTTGAGTTGGCAAAGAGAGACTTGGAAATGGCAGAGGTACAAATGGGATTTGAAGAAAAGGACATGGATAAGGAACTGGGATATGGTTATGGTTATGGTTATGTCATATCTTAA 1194 0.392 MENYQQGKEIEKFTWVIENFSKKNTKKLRSKSFQVGGCKWQIHVHRIEKAKGMEYLSLYLKVGGSVPSFGWSKYAYFSLALINHMDPQKSVVRETQQKFNAGYRSWGSSFVALNDFYDPKQGYLLNNVCIIEVRISVSDVAFDTNIFNINNNNNVSSSTHHSNNQTSNETLSRSTSTTTQEDDVNGITTLQPNSDDVVHYVPTAPPLLYPTIICDDEPLVVPLNTTLSEILDVKSLGEEEKAYVPLLEEVCSWHPSLIQSQMRKSPKFIQWAFIALGQVLHFLKTTKAKDMDENAFNKLQCLWEELQLFGFELSWLEPHVESALDMKGYLERAKTLKENVIGLEIEMKMLRAKMAVAEIDLELAKRDLEMAEVQMGFEEKDMDKELGYGYGYGYVIS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00774 397 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 7 147 IPR008974 GO:0005515
Adu06g00774 397 MobiDBLite consensus disorder prediction 153 188 - -
Adu06g00774 397 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 373 - -
Adu06g00774 397 ProSiteProfiles MATH/TRAF domain profile. 10 135 IPR002083 GO:0005515
Adu06g00774 397 Coils Coil 326 381 - -
Adu06g00774 397 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 373 - -
Adu06g00774 397 SUPERFAMILY TRAF domain-like 12 140 - -
Adu06g00774 397 SMART math_3 12 116 IPR002083 GO:0005515
Adu06g00774 397 Pfam MATH domain 17 137 IPR002083 GO:0005515
Adu06g00774 397 CDD MATH 12 135 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00774 Adu-Chr6 9332316 9335441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00774 - - ahf:112695910 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00774 06 9332316 9335441 Adu06g00774 06 9332316 9335441 ECH
Adu06g00774 06 9332316 9335441 Adu07g00589 07 6123952 6136871 ECH
Adu02g02561 02 91365727 91369536 Adu06g00774 06 9332316 9335441 PCT