Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00589 ATGACCGTGATGACTCCCGCTCCCATTGACCAGCAGGACGACGAGGAGATGCTTGTTCCGCACACTGATTTGGCTGAGAACAATCACCAACCTATGGAAGTTGTAGCTCAACCTGAAGCTGCTAACACTGTGGAGAGTCAGCCTGTTGAGGACCCTCAATCATCGAGATTCACCTGGAAAATTCCTGAATTTTCTAGGATGAATACAAAAAAGCTCTATTCAGATGTATTTATTGTTGGTGGTTATAAATGGCGTGTGCTCATCTTCCCTAAAGGGAACAACGTGGACTATTTGTCCATGTATTTGGATGTTGCAGATTCATCTAATTTGCCGTATGGTTGGAGTAGATATGCACAATTTAGCTTGGCAGTTATCAATCAAGTCCATAATAAGTACTCTGTGAGAAAAGACACGCAGCACCAATTCAATGCACGAGAAAGTGATTGGGGTTTCACGTCCTTCATGCCACTTGGTGAATTGTATGATGCCAGTAGAGGCTATCTTGTGAATGATACTCTTGTAGTTGAAGCTGAGGTTCTTGTTCGTAGAATCGTTGATTATTGGACTTACGATTCAAAGAAAGAGACAGGTTATGTTGGGCTTAAGAACCAGGGAGCCACATGTTATATGAATTCTCTTCTCCAAACACTCTACCATATTCCTTACTTTCGAAAGGCAGTGTACCATATGCCAACAACAGAAAATGATATGCCGTCTGGAAGCATCCCTTTGGCTCTGCAGAGTCTATTCTACAAGCTCCAGTATAGTGATACCAGTGTTGCAACAAAGGAACTGACAAAATCTTTTGGATGGGATACCTATGATTCTTTCATGCAGCATGATGTTCAAGAACTAAATAGAGTCCTTTGTGAAAAACTTGAAGACAAAATGAAGGGAACTGTTGTGGAGGGAACTATCCAGAAGTTATTTGAAGGGCATCATATGAACTATATTGAGTGCATCAACGTGGACTATAAATCAACTAGAAAGGAGTCATTTTATGACCTTCAGCTTGATGTCAAGGGCTGTCGTGACGTTTATGCTTCCTTTGATAAGTATGTTGAAGTTGAACCTCTTGAGGGTGACAACAAATACCATGCTGAACAATTTGGTTTGCAGGATGCTAAGAAGGGTGTCCTATTTATTGATTTCCCTCCTGTTCTTCAGCTTCAGCTGAAAAGATTTGAATACGACTTTATGAGGGACACTATGGTAAAGATTAATGACCGTTATGAGTTTCCTTTGCAACTTGACCTTGATCGTGAGGATGGGAAGTATTTATCACCTGAGGCTGATAGGACAGTTCGCAATCTTTACACACTCCACAGTGTTTTGGTTCACAGTGGTGGTGTGCATGGCGGACATTATTATGCGTTTATAAGGCCAACTCTGTCTGAGCAATGGTACAAATTTGATGATGAGAGAGTGACAAAAGAAGATACTAAGCGGGCATTAGAGGAGCAATATGGTGGTGAGGAGGAGTTACCTCAGACAAATCCTGGATTCAATAATACTCCGTTCAAATTCACCAAATATTCAAATGCTTACATGCTGGTGTACATACGTGAATCCGACAAGGACAAAATAATATGCAATGTTGATGAGAAAGACATTGCTGAACATTTAAGGGAGAGGTTGAAGAAAGAGCAGGAGGAAAAAGAACACAAAAAGAAAGAAAAGGCTGAGGCCCACCTTTATACTATTATAAAGGTGGCACGGGATGAAGATCTTTCTGAGCAGATTGGAAAGGACATATATTTTGATCTTGTAGACCATGACAAAGTTAGGAGTTTCCGTGTCCAAAAGCAGTTGTCTTTTAACACATTTAAGGAAGAGGTCGCTAAAGAGTTTGGTATACCAGTTCAATTTCAGCGATTTTGGCTATGGGCGAAGCGACAGAACCATACCTATCGTCCTAACCGGCCATTGACACACATCGAGGAAGCACAGTCTGTTGGACAATTGAGAGAGGTGTCAAACAAGGTTCACAATGCAGAATTAAAATTATTTTTGGAAGTGGAGCTTGGACCGGATTTACGTCCCATAGCACCACCTGAAAAGACAAAGGATGATATATTACTTTTCTTCAAGTTATATGATCCTGAAAAAGAGGAGCTACGTTATGTTGGAAGGTTATTTGTGAAGAGTACTGGCAAGCCGTCAGAAATCTTAACAAAGTTGAATGAAATGGCTGGTTATGATCCTGATGAAGATATTGGACTTTATGAGGAAATCAAGTTTGAACCAAATGTCATGTGTGAGCCTATTGATAAGAAATTAACATTTCGAGCAAGCCAGCTAGAAGATGGAGATATTGTATGCTTTCAAAAAGGTCCTGTAACTGTAATGGATAGCGAGGATCATATCCGCTATCCAGATGTGCCTTCGTACTTGGAATATGTGCACAACCGCCAGGTTGTTCACTTTCGATCTCTTGATAAACCTAAAGAAGATGACTTCTGCCTGGAGATGTCAAGGCTTTATACATATGATGATGTGGTGGAAAAAGTTGCTCAACAGCTTGGTTTGGAAGATCCATCCAAGATTAGGCTTACTCCACACAACTGCTACTCTCAGCAACCAAAACCCCAACCCATTAAGTATAGAGGAGTTGAACATTTGTCTGACATGCTGGTACACTACAACCAGACGTCAGATATATTGTACTATGAAGTACTTGACATCCCTCTGCCGGAATTACAAGGTTTGAAAACTCTGAAAGTTGCATTTCACCATGCAACCAAGGATGAAGTTGTTATTCATACCATCAGACTTCCAAAGCAGAGCACTGTGGGGGATGTCCTCGATGACCTCAAAACTAAGGTGGAACTGTCTCATCCTAATGCTGAGCTTAGGTTGCTTGAAGTCTTCTATCACAAGATATACAAGGTCTTCCCTCCCAATGAAAAGATTGAAAACATTAATGACCAATATTGGACATTACGAGCCGAGGAGATTCCAGAAGAAGAGAAAAATCTTGGTCCGCATGACCGCCTAATTCATGTCTATCATTTTACAAAAGACACAGCTCAGAATCAAATGCAAATTCAGAACTTTGGGGAACCTTTTTTCTTGGTCATTCATGAAGGTGAGACTTTGACTGAAATTAAGGACAGAATAAAAAAGAAACTTCAAGTTCCTGATGATGAGTTTGCGAAGTGGAAGTTTGCATTTTTCTCATTAGGGCGTCCTGAGTATCTTCAAGACTCTGACATTGTATCCAGTCGTTTTCAGAGAAGAGATGTTTATGGTGCATGGGAGCAGTATCTTGGATTGGAGCATACTGACAATGCTCCTAAAAGAGCATATGCAGTTAACCAGAATCGCCACACGTTTGAGAAGCCAGTAAAGATCTACAATTAG 3363 0.4074 MTVMTPAPIDQQDDEEMLVPHTDLAENNHQPMEVVAQPEAANTVESQPVEDPQSSRFTWKIPEFSRMNTKKLYSDVFIVGGYKWRVLIFPKGNNVDYLSMYLDVADSSNLPYGWSRYAQFSLAVINQVHNKYSVRKDTQHQFNARESDWGFTSFMPLGELYDASRGYLVNDTLVVEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVEPLEGDNKYHAEQFGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKEDTKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLSEQIGKDIYFDLVDHDKVRSFRVQKQLSFNTFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTHIEEAQSVGQLREVSNKVHNAELKLFLEVELGPDLRPIAPPEKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKPSEILTKLNEMAGYDPDEDIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIVCFQKGPVTVMDSEDHIRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLGLEDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVIHEGETLTEIKDRIKKKLQVPDDEFAKWKFAFFSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRAYAVNQNRHTFEKPVKIYN 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00589 1120 CDD MATH 56 179 IPR002083 GO:0005515
Adu07g00589 1120 Pfam Ubiquitin carboxyl-terminal hydrolase 199 520 IPR001394 GO:0004843|GO:0016579
Adu07g00589 1120 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 200 215 IPR018200 GO:0004843|GO:0006511
Adu07g00589 1120 Gene3D Cysteine proteinases 196 524 - -
Adu07g00589 1120 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 199 523 IPR028889 -
Adu07g00589 1120 Pfam ICP0-binding domain of Ubiquitin-specific protease 7 624 878 IPR024729 -
Adu07g00589 1120 Gene3D - 684 803 - -
Adu07g00589 1120 SUPERFAMILY TRAF domain-like 52 184 - -
Adu07g00589 1120 ProSiteProfiles MATH/TRAF domain profile. 54 179 IPR002083 GO:0005515
Adu07g00589 1120 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 1045 - -
Adu07g00589 1120 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 439 456 IPR018200 GO:0004843|GO:0006511
Adu07g00589 1120 CDD peptidase_C19C 197 525 - -
Adu07g00589 1120 Pfam MATH domain 61 180 IPR002083 GO:0005515
Adu07g00589 1120 Pfam Ubiquitin-specific protease C-terminal 888 1098 IPR029346 -
Adu07g00589 1120 Coils Coil 532 563 - -
Adu07g00589 1120 SMART math_3 56 160 IPR002083 GO:0005515
Adu07g00589 1120 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 52 195 IPR008974 GO:0005515
Adu07g00589 1120 SUPERFAMILY Cysteine proteinases 194 551 IPR038765 -
Adu07g00589 1120 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN 4 1045 - -
Adu07g00589 1120 Gene3D - 804 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00589 Adu-Chr7 6123952 6136871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00589 199 488 Miscellaneous Gene Families AT2G24640 24.290 1.65e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00589 K11838 - gmx:100800328 2143.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00589 07 6123952 6136871 Adu07g00589 07 6123952 6136871 ECH
Adu06g00774 06 9332316 9335441 Adu07g00589 07 6123952 6136871 ECH
Adu02g02563 02 91379044 91380401 Adu07g00589 07 6123952 6136871 ECH