Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02561 ATGGAGGTTTACTTTCGGGTTGAAACAATTGTGAAGTTCACTTGGACCATAGAAAATTTCTACGAGTTAGTAGAATGCAGGGAGCTCCACTCCGAAACCTTCTTCACTGGGTCCTATCCATGGCGGATTATGATAACCCCAAAAGCTGCCAACACCGGAAAAGGCTTGTCAATTTATTTGGATGCTGTGGACATTGCTAATGCCAAAACCAGATCTGCTTGCTTCAAGTTGTCTCTAATTAATGAATTCTGTCGCAAAAAGACCAAAACTAGGACAAAGAACAAGCACTTGTTCAGCTCAGAGAATGTTAAATTTGGTTACAAATCGTTTATATCTTCAGATGAATTTCTAAGTCCTAACAATGGGTTTCTTGTGGATAACACATGCACAATTGTTGCTGAGGTTTTTGGATATGATGATCAAAATACAGATACTAATGATGATGACTACCAACATCATGATGAAAATACAGATACTAATGATGATGATGATGATGAAGATGATGATGAAGAAGAAGATGATGATGATGACTCTCCTAAGGATACTGTGTTAGTGGATTTCAAGGGTCTATGCAGAATAGAGAAAGAGTTTGTTCAATTGTTGGAAAAAGTATGTTCAAGGCGTCCAAATCTTGTTGAAAGCCATAGAAAGAGGAACATGAGTCAAAAGTTCAATGAATGGTCGTTCACAACATTAGGGAAAGTGTTGCAATTTCTTAAGACTAAGAAAGTGAAGGACATGATGAACGATGATGCTTGTAAAGAGCTTGAAGATTTGTGGGAGGAACTTGAGATAGTTAAGTTTGATGATTTGAGTTGGTTGAAGGAACATGTTGAATCTGCATTGGGTATGAAGAATCATATGGAGAGAGGGATGAAGGTGAAAAGGCTTAAGGATAATGTAGTTGCTCTAGAGGGTGAGGTGAAGAGCCTCAAAGAAAAAATGATTGTTGCAGAGAGAGATCTTGAAAAAGCAAGAAGTGAATTAGTGAAAGAGGAAGAAGGCTTTGTAGACAAATTTCTTGACTCCAAAAATGGGTTTCTTGTTAACGACTCCTGCATCATTGTTGCCAAAGTTTCTGTGATTAACAACAATAGCTCGCTTGGCAGCAGGTTAATAGATTTAAATGATGGAGGGAAAATAAAAAAGGTTCATCTTGAATTGCTCGATAAAGCATGTTCAAAGCACCCTTCTATTATTGAAAGCCTTATAAGGAGTAGCCAAAGGTTCATTGAACGTGGATTCACAGCTTTGGGAAGAGTTCTGTATTTTCTCAAGACTAAGAAAATGAAGGATATGATGAATGACGATGCTGCTCGTAAAGAGCTTCAGGATTTATGGGATGAAGTTGAGAGAGTTGGATTTGATGATTTGACATGGCTTGAGCCTCATGTTAGATCAGCACTGAGTATGAAAGATTATATTCAGAGAGAAGAGGTAGTGACAAAGCTGAAGGGAAATGTGGTGGATCTTGAAGATAGGGTTAAGAGGGCAAAAAGGGAATTGGAAATTGCTGAAAAAGACTTTGATAAGAGAGATTTGAATGATGCATTAGCTCATGGAATATCCTATCTGTAA 1578 0.3777 MEVYFRVETIVKFTWTIENFYELVECRELHSETFFTGSYPWRIMITPKAANTGKGLSIYLDAVDIANAKTRSACFKLSLINEFCRKKTKTRTKNKHLFSSENVKFGYKSFISSDEFLSPNNGFLVDNTCTIVAEVFGYDDQNTDTNDDDYQHHDENTDTNDDDDDEDDDEEEDDDDDSPKDTVLVDFKGLCRIEKEFVQLLEKVCSRRPNLVESHRKRNMSQKFNEWSFTTLGKVLQFLKTKKVKDMMNDDACKELEDLWEELEIVKFDDLSWLKEHVESALGMKNHMERGMKVKRLKDNVVALEGEVKSLKEKMIVAERDLEKARSELVKEEEGFVDKFLDSKNGFLVNDSCIIVAKVSVINNNSSLGSRLIDLNDGGKIKKVHLELLDKACSKHPSIIESLIRSSQRFIERGFTALGRVLYFLKTKKMKDMMNDDAARKELQDLWDEVERVGFDDLTWLEPHVRSALSMKDYIQREEVVTKLKGNVVDLEDRVKRAKRELEIAEKDFDKRDLNDALAHGISYL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02561 525 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 6 143 IPR008974 GO:0005515
Adu02g02561 525 SMART math_3 12 116 IPR002083 GO:0005515
Adu02g02561 525 MobiDBLite consensus disorder prediction 158 180 - -
Adu02g02561 525 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 333 - -
Adu02g02561 525 MobiDBLite consensus disorder prediction 143 181 - -
Adu02g02561 525 Pfam MATH domain 18 135 IPR002083 GO:0005515
Adu02g02561 525 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 338 508 - -
Adu02g02561 525 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 333 - -
Adu02g02561 525 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 338 508 - -
Adu02g02561 525 Coils Coil 481 515 - -
Adu02g02561 525 SUPERFAMILY TRAF domain-like 12 138 - -
Adu02g02561 525 Coils Coil 294 335 - -
Adu02g02561 525 ProSiteProfiles MATH/TRAF domain profile. 10 135 IPR002083 GO:0005515
Adu02g02561 525 CDD MATH 12 135 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02561 Adu-Chr2 91365727 91369536 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02561 - - ahf:112729672 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02561 02 91365727 91369536 Adu06g00774 06 9332316 9335441 PCT