Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00928 ATGGATCCTCTGACAATTAGTGATGAGGTGACTAGCAGTGTGGAAGCAAAGAGAATGTTCAAGGCTTTGATCATTGATGCTCAGAATCTCATTCCCAAGCTCATGCCTCAGGCTATTAAGAACATTCAACTTGTTCAGGGCGATGGTGGCCCAGGATCTATTCAGGAGTTAACCATTGTTCAAGGTTCTGAAACCAAACACTTGAAGCATAGAATTGATGCAATAGACAAAGAGAATCTCACATACAGCTACAGTGTGATTGAGGGGGACAAGGCTGAATCAGTGTCATATGACATAAAATTTGAGCCTACTCCTGAAGGTGGTTGCAAGTCCAAGAGTGTGAGCAAGTTTTATCCCAAACAAGGTGTTGAGATCAAAGAGGAAGATATCAAGGCTTCTAAAGAGGAATCTTTGGCTGTCTTTAAGGTTGTTGAAGCCTATCTTGTTGCTAACCCCGAGGCATATGCTTGA 471 0.4246 MDPLTISDEVTSSVEAKRMFKALIIDAQNLIPKLMPQAIKNIQLVQGDGGPGSIQELTIVQGSETKHLKHRIDAIDKENLTYSYSVIEGDKAESVSYDIKFEPTPEGGCKSKSVSKFYPKQGVEIKEEDIKASKEESLAVFKVVEAYLVANPEAYA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00928 156 Pfam Pathogenesis-related protein Bet v 1 family 5 150 IPR000916 GO:0006952
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 PRINTS Major pollen allergen Bet V1 signature 140 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00928 156 SMART Bet_v_1_2 5 151 IPR000916 GO:0006952
Adu04g00928 156 Gene3D - 4 154 IPR023393 -
Adu04g00928 156 CDD Bet_v1-like 5 148 - -
Adu04g00928 156 PANTHER - 1 156 - -
Adu04g00928 156 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 156 - -
Adu04g00928 156 SUPERFAMILY Bet v1-like 4 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00928 Adu-Chr4 14863733 14865094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00928 - - pvu:PHAVU_009G252400g 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00928 04 14863733 14865094 Adu04g00928 04 14863733 14865094 ECH
Adu01g02608 01 95363652 95364351 Adu04g00928 04 14863733 14865094 PCT
Adu04g00928 04 14863733 14865094 Adu01g02606 01 95358568 95359419 PCT