Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02606 ATGGGCGTCTTCACTTTTGAGGATGAAATCACCTCCACCGTGCCCCCTGCTAAGCTTTACAATGCTTTGAAGGATGCCGACTCCCTCACCCCTAAAATTATTGATGACGTCAAGAGTGTTGAAATTGTTGAGGGAAACGGTGGTCCCGGAACCATCAAGAAACTCAACATTGTCGAGGGTGCGGAAACCAAGTTTATCTTGCACAAGGTGGAGGCAATAGATGAGGCTAACTTTGCATACAACTACAGCGTGGTTGGAGGAGTGGCTCTGCCTCCCACGGCGGAGAAGATAACATTTGAGACAAAGCTGGTACAAGGACCCAACGGAGGATCCATTGGGAAGCTTACTCTCAAGTACCACTCTAAAGGAGATGCAAAGCCAGATGAGGAAGAGTTGAAGAAGGGTAAGGCCAAGGGTGAAGGTCTCTTCAGGGCTATTGAGGGTTACGTCTTGGCCAACCCTTCTCAGTATTAG 474 0.4873 MGVFTFEDEITSTVPPAKLYNALKDADSLTPKIIDDVKSVEIVEGNGGPGTIKKLNIVEGAETKFILHKVEAIDEANFAYNYSVVGGVALPPTAEKITFETKLVQGPNGGSIGKLTLKYHSKGDAKPDEEELKKGKAKGEGLFRAIEGYVLANPSQY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 48 57 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 CDD Bet_v1-like 4 150 - -
Adu01g02606 157 Gene3D - 2 156 IPR023393 -
Adu01g02606 157 SUPERFAMILY Bet v1-like 2 156 - -
Adu01g02606 157 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Adu01g02606 157 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 87 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02606 157 PANTHER - 1 155 - -
Adu01g02606 157 PANTHER ABA-RESPONSIVE PROTEIN 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02606 Adu-Chr1 95358568 95359419 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02606 - - gmx:100500525 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02606 01 95358568 95359419 Adu01g02606 01 95358568 95359419 ECH
Adu01g02606 01 95358568 95359419 Adu04g00924 04 14842042 14844484 PCT
Adu04g00928 04 14863733 14865094 Adu01g02606 01 95358568 95359419 PCT