Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02608 ATGGGAGTCACAACCTTTAAGCAGGAGTATTCATCTTCTGTTGCACCATCACGTATGTTCCAGGCTTTGATCATAGACTCCAGAACTTTGATTCCAAAGCTGTTGCCACAGTTTGTAAAAGAAGTCAACCTCATCCAAGGAAACGGGGAAGCTGGTAGCATTGAACAAGTTAACTTCAGTGAAGGCGATCCGTTAGGCGACAAGCTCGAGTCTGTTGCTTATGAGGTGAGATTTGAGGCCACTGATGATGGAGGTTGCCTCTATAAAATGAGTAGCAATTACAACACCATCGGTGAGTATCAAGTGACAGAGGAAGAGGTGAAGGAAGGAAGAGAAAGCACAATTGGAATTTACAAAGTTGTGGAGTCTTACCTGAAGGAGAATCCAAATGTCTATGCTTAA 402 0.4328 MGVTTFKQEYSSSVAPSRMFQALIIDSRTLIPKLLPQFVKEVNLIQGNGEAGSIEQVNFSEGDPLGDKLESVAYEVRFEATDDGGCLYKMSSNYNTIGEYQVTEEEVKEGRESTIGIYKVVESYLKENPNVYA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02608 133 CDD Bet_v1-like 5 125 - -
Adu01g02608 133 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 61 133 - -
Adu01g02608 133 PANTHER - 1 64 - -
Adu01g02608 133 PANTHER - 61 133 - -
Adu01g02608 133 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 64 - -
Adu01g02608 133 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 62 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02608 133 Pfam Pathogenesis-related protein Bet v 1 family 1 64 IPR000916 GO:0006952
Adu01g02608 133 Gene3D - 1 62 IPR023393 -
Adu01g02608 133 Gene3D - 63 133 IPR023393 -
Adu01g02608 133 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02608 133 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02608 133 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu01g02608 133 SUPERFAMILY Bet v1-like 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02608 Adu-Chr1 95363652 95364351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02608 - - gmx:100527307 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02608 01 95363652 95364351 Adu01g02608 01 95363652 95364351 ECH
Adu01g02608 01 95363652 95364351 Adu04g00928 04 14863733 14865094 PCT
Adu04g00929 04 14876209 14934951 Adu01g02608 01 95363652 95364351 PCT