Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02664 ATGCAACAGAAGTGGCGTGCATTGACGAGGGTGAAAGAGGTGGCAAAGACAAAGAAAAACAAAAACAACAACAATGACGGTACAAGTGTCGGGGTAGCAGGCATAGAAAATTATAATAAGTTAATTGTGGGCGAGAGAGTGTGCTCCGTTCCGTTAATTTTTCTCATCAATGCCCTGTCGGAGTTAATCTCCTCTTCCTTCATCTTCTTCCGTCATCTTCACCTTCATCATCATCATCATCATCATCATCTCCCTTTTCCCCCTTCTCATCGATTCCTAGGGTTTCCCTTCGATTCATATCAAGGTTTTGTTTCAAATTCGAAGCTTGCCATCTTCATCATCATGTCGATGAGTGAGCGGAAGACCATCGACCTGGAGCAGGGATGGGATTTCATGCAGAAGGGCATCACCAAGCTCAAGAACATTCTAGAAGGCTTGCCTGAACCTCAGTTCAGCTCCGAGGACTACATGATGCTTTACACAACCATCTATAACATGTGCACCCAAAAGCCTCCTCATGACTATTCCCAACAACTCTATGACAAGTACAAGGAGGCATTTGAAGAGTACATCCAATCAACGGTATTACCTTCTTTGAGAGAGAAGCATGATGAATTTATGTTGAGAGAACTTGTAAAGAGGTGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCTCGTTTCTTTCATTATTTGGATCGCTACTTTATTGCCCGGAGGTCACTCCCACCCCTTAATGAAGTTGGCTTAACTTGCTTCCGTGATTTGGTTTACAAGGAGCTAAATGGGAAAGTTAGAGATGCAGTTATTTCTCTTATTGATCAAGAACGTGAAGGAGAGCAGATTGATCGGGCTTTATTAAAGAATGTATTAGATATATTTGTTGAAATTGGGATGGGGCAAATGGATCACTATGAGAATGATTTTGAAACTGCAATGCTTAAGGACACTTCTGCTTATTACTCTCGGAAGGCTTCTAATTGGATCCTAGAAGATTCTTGTCCTGATTACATGCTCAAGGCTGAGGAGTGCTTAAAACGGGAGAAAGATAGGGTTGCTCATTATTTGCACTCCAGTAGCGAGCCAAAGTTGTTAGAGAAAGTTCAACATGAGCTGTTATCTGTGTACGCAAACCAACTCCTCGAGAAAGAGCACTCTGGATGTCATGCTTTGCTTAGAGATGACAAGGTTGAAGATCTGTCACGGATGTTCAGGCTATTTTCTAAAATACCTAAAGGCTTAGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCACTGAGGGTATGGTATTGGTTAAGCAGGCTGAAGATGCAGCTAGTACCAAAAGGGCAGATAAAAAGGATATCGTTGGTCTGCAGGAGCAGGTTTTTGTTCGGAAAGTGATTGAGCTGCACGACAAGTACCTCGCATATGTAAATGACTGTTTCCAGAATCATACTCTTTTCCACAAGGCTCTCAAGGAGGCTTTTGAGGTCTTTTGCAATAAAGGTGTTGCTGGGAGCTCCAGCGCTGAACTGCTTGCCACATTCTGTGACAACATTCTTAAGAAAGGTGGCAGTGAAAAATTGAGTGACGAAGCAATTGAAGAAACTCTGGAAAAGGTGGTCAAGCTACTTGCCTACATTAGCGACAAAGATTTGTTTGCTGAATTTTATAGGAAGAAGCTTGCTCGAAGACTTCTTTTTGACAAGAGTGCCAACGATGATCATGAGAGAAGTATTTTGACAAAATTGAAGCAACAATGTGGTGGACAGTTTACATCAAAGATGGAAGGAATGGTTACAGACTTGACACTGGCAAAGGAGAATCAAACTAGCTTTGAGGAGTATTTAAGCAATAATCCTAATGCAGACCCTGGAATAGACTTGACAGTTACAGTTCTGACTACTGGCTTCTGGCCCAGTTACAAATCTTTTGATCTCAATCTTCCAGCGGAAATGATCAGGTGCGTTGAAGTTTTCAAGGAATTTTATCAAACTAAAACAAAGCACAGAAAGCTTACATGGATTTACTCCTTGGGTACTTGTAATATAAGTGGGAAATTTGAACCAAAAACTGTGGAGCTGATTGTTACAACCTACCAGGCTTCAGCATTGCTTCTTTTCAATTCCTCGGATAGACTCAGTTATTCGGAGATCATGACTCAGTTAAACCTATCAGATGATGATGTTTCTAGACTGCTTCACTCTATGTCATGTGCAAAGTACAAGATTCTTAACAAAGAACCAAACACAAAAATGATATCTTCTACAGATGAATTTGAATTCAATTCAAAATTTACCGACAAAATGAGGAGGATCAAGATTCCTCTCCCTCCTGTGGACGAGAAGAAAAAGGTAATTGAGGATGTTGACAAGGATAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGCAAAGTTTTGGGATACCAACAGTTAGTCATGGAATGTGTTGAGCAGTTAGGTCGCATGTTTAAGCCTGACGTCAAGGCAATTAAAAAGCGGATTGAAGATTTGATTTCTCGGGACTACTTGGAAAGAGACAAAGAAAATCCAAATATGTTCAAGTACTTGGCTTGA 2577 0.4078 MQQKWRALTRVKEVAKTKKNKNNNNDGTSVGVAGIENYNKLIVGERVCSVPLIFLINALSELISSSFIFFRHLHLHHHHHHHHLPFPPSHRFLGFPFDSYQGFVSNSKLAIFIIMSMSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYKEAFEEYIQSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFETAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPKGLDPVSSIFKQHVTTEGMVLVKQAEDAASTKRADKKDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIRCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTVELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVSRLLHSMSCAKYKILNKEPNTKMISSTDEFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKENPNMFKYLA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02664 858 Gene3D Cullin Repeats 256 378 - -
Adu01g02664 858 Gene3D Cullin Repeats 504 617 - -
Adu01g02664 858 PANTHER CULLIN 116 857 IPR045093 -
Adu01g02664 858 Gene3D Cullin Repeats 116 255 - -
Adu01g02664 858 PANTHER CULLIN 3B 116 857 - -
Adu01g02664 858 ProSiteProfiles Cullin family profile. 503 733 IPR016158 -
Adu01g02664 858 Pfam Cullin family 138 761 IPR001373 GO:0006511|GO:0031625
Adu01g02664 858 Pfam Cullin protein neddylation domain 788 850 IPR019559 -
Adu01g02664 858 SMART Cullin_Nedd8_2 785 852 IPR019559 -
Adu01g02664 858 SMART cul_2 534 683 IPR016158 -
Adu01g02664 858 SUPERFAMILY Cullin homology domain 502 771 IPR036317 -
Adu01g02664 858 Gene3D Cullin Repeats 381 503 - -
Adu01g02664 858 SUPERFAMILY "Winged helix" DNA-binding domain 773 858 IPR036390 -
Adu01g02664 858 Gene3D Cullin; Chain C, Domain 2 621 774 - -
Adu01g02664 858 Gene3D - 775 858 IPR036388 -
Adu01g02664 858 SUPERFAMILY Cullin repeat-like 125 498 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02664 Adu-Chr1 96033131 96042716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02664 K03347 - gmx:100793682 1451.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02664 01 96033131 96042716 Adu04g01035 04 18813674 18821061 PCT
Adu10g00027 10 412654 420067 Adu01g02664 01 96033131 96042716 PCT