Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00027 ATGCGCGTGGGAGAGGGAGAGCGAGGCATCCCATCTCATCCCATCCATGATCTGAAGACTCCAACGCCATCTCCTCTCACCACCACGACCTCCTTTTCGACTCCATGTCCCACAACGACCCCACCGGCCGCCAACCTCTCCCGCAAGAAAGCCACGCCTCCCCACCCTGCTAAGAAGCTCCTCATCAAGCTCCACAAAGGTAAGCCAACACTGCCCACAAATTTTGAGGAGGTTACATGGGCAAAATTGAAGTCTGCTATTTGTGCTATATTCTTGAAGCAACCTGACTCTTGTGATTTGGAAAAGCTTTATCAGGCTGTCAGTGATCTTTGCATATATAAAATGGCTGGAAATCTTTATCAGCGAATTGAAACAGAATGCGAAGCACATATATCTACAGCTTTGCAGTCTTTGGTTGGTCAAAGCCCAGATTTGGTTGTTTTTCTATCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGGGGTATAGCCTTGTATCTGGATAGGACATATGTGAAGCAAACAGCAAATGTACGGTCCTTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTATCTCCTGAAGTTGAACACAAAACTGTTACTGGTCTTCTAAGAATGATTGAAAGTGAAAGGTGGCAGGGAGTGTATTTCCTTGAAAGCTTCGAGAAGCCATTTCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTATTTGAAGCATGTGGAGACAAGATTGCAAGAGGAACACGACAGATGCCTGATCTACTTGGATGCGAGTACTAGGAAGCCGCTGATAGCCACAGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTGTGCTTATGGATGGAAATCGCATTGAAGACCTTCAGAGAATGTACTCACTCTTTTTAAGGGTCAATGCCCTTGAGTCACTAAGACAAGCCCTAAGTTCATATATAAGGAGAACTGGGCAGGCCATTGTTATGGATGAGGAGAAAGATAAAGACATGGTTTCTTCACTTCTGGAGTTTAAGGCTTCTCTTGACAGAATATGGGAAGAAAGTTTTTATAAGAATGAAGTATTCTCTAACACCATTAAAGATTCATTTGAGCATCTTATCAATCTACGACAGAACCGACCAGCAGAGTTGATTGCCAAGTTCTTAGATGAGAAGCTCCGTGCAGGTAACAAGGGTACTTCTGAAGAGGAATTGGAGGGAACACTTGATAAAGTCCTGGTTTTATTTAGGTTCATTCAGGGCAAAGATGTGTTTGAAGCTTTTTATAAGAAAGATCTTGCAAAAAGACTGCTTTTGGGAAAAAGTGCGTCTATTGATGCAGAGAAGTCTATGATATCCAAGTTGAAGACTGAGTGTGGCAGTCAGTTCACAAACAAATTGGAAGGAATGTTCAAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCATCCCAAGCAAGGACAAAACTCCCATCAGGAATTGAAATGAGTGTTCATGTCCTGACAACTGGTTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTGAGCAAATACAGTGGAAGGCGTTTGATGTGGCAAAATTCATTAGGTCACTGTGTCTTGAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGTTGGCAGTCTCCCTATTTCAGACTGTTGTTTTGATGCTATTCAATGATGCCGAGAAACTGAGCTTTCAAGATATCAAGGACTCTACCAGTATCGAGGACAAAGAACTGAGAAGGACTCTGCAATCGCTTGCATGCGGAAAAGTTCGTGTCCTACAGAAGTCGCCGAAGGGTAGAGATGTGGAGGATGATGACTCATTCTCTTTTAATGATGGCTTTACAGCTCCTCTTTACCGTATAAAGGTGAATGCCATTCAGTTGAAGGAGACAGTGGAGGAAAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAGTATCAGATTGATGCTGCCATTGTGAGGATAATGAAGACGAGGAAAGTACTTAGTCACACCCTTCTTATTACCGAACTCTTCCAACAGCTCAAGTTTCCAATAAAACCAGCTGATTTGAAGAAAAGGATTGAAAGCCTGATTGACAGAGAGTATCTGGAGAGGGACAAGAGCAACCCCCAAATATACAATTATCTGGCATAG 2280 0.4232 MRVGEGERGIPSHPIHDLKTPTPSPLTTTTSFSTPCPTTTPPAANLSRKKATPPHPAKKLLIKLHKGKPTLPTNFEEVTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCIYKMAGNLYQRIETECEAHISTALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERWQGVYFLESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFSVLMDGNRIEDLQRMYSLFLRVNALESLRQALSSYIRRTGQAIVMDEEKDKDMVSSLLEFKASLDRIWEESFYKNEVFSNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKSPKGRDVEDDDSFSFNDGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00027 759 ProSiteProfiles Cullin family profile. 403 632 IPR016158 -
Adu10g00027 759 Gene3D Cullin; Chain C, Domain 2 518 673 - -
Adu10g00027 759 Gene3D Cullin Repeats 198 298 - -
Adu10g00027 759 SMART cul_2 433 582 IPR016158 -
Adu10g00027 759 SMART Cullin_Nedd8_2 688 753 IPR019559 -
Adu10g00027 759 Gene3D - 686 759 IPR036388 -
Adu10g00027 759 SUPERFAMILY Cullin repeat-like 74 399 IPR016159 -
Adu10g00027 759 PANTHER CULLIN 40 759 IPR045093 -
Adu10g00027 759 Gene3D Cullin Repeats 67 197 - -
Adu10g00027 759 ProSitePatterns Cullin family signature. 732 759 IPR016157 GO:0006511|GO:0031461|GO:0031625
Adu10g00027 759 MobiDBLite consensus disorder prediction 21 46 - -
Adu10g00027 759 SUPERFAMILY Cullin homology domain 400 670 IPR036317 -
Adu10g00027 759 MobiDBLite consensus disorder prediction 1 54 - -
Adu10g00027 759 SUPERFAMILY "Winged helix" DNA-binding domain 671 759 IPR036390 -
Adu10g00027 759 Pfam Cullin family 80 660 IPR001373 GO:0006511|GO:0031625
Adu10g00027 759 Gene3D Cullin Repeats 402 513 - -
Adu10g00027 759 PANTHER CULLIN-4A 40 759 - -
Adu10g00027 759 Pfam Cullin protein neddylation domain 691 751 IPR019559 -
Adu10g00027 759 Gene3D Cullin Repeats 300 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00027 Adu-Chr10 412654 420067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00027 K10609 - gmx:100805491 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00027 10 412654 420067 Adu10g00027 10 412654 420067 ECH
Adu10g00027 10 412654 420067 Adu01g02664 01 96033131 96042716 PCT