Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01035 ATGTCTATGAGTGAGCGCAAGACTATTGACCTAGAGCAAGGATGGGACTTTATGCAGAAGGGCATAATGAAGCTGAAGAATATTCTGGAAGGGTTGCCTGAGCCTCAGTTCAGCTCTGAGGACTACATGATGCTTTACACGACCATATATAATATGTGCACTCAGAAGCCTCCTCATGATTATTCCCAGCAACTATATGACAAGTACAAGGAAGCATTTGAAGAATACATCCTGTCGACGGTGTTGCCTTCTTTGAGAGAGAAGCATGATGAATTTATGTTGAGAGAACTTGTGAAGAGGTGGGCAAACCATAAAATTATGGTTAGGTGGCTTTCTCGTTTCTTTCACTATTTGGACCGTTACTTTATTGCTCGGAGATCACTTCCACCGCTTAATGAAGTTGGGCTGACTTGCTTCCGTGATTTGGTTTACAAGGAACTAAATGGGAAAGTGAGAGATGCAGTAATTTCTCTTATTGATCAAGAACGAGAAGGAGAGCAGATTGATCGAGCTCTATTAAAAAATGTATTAGATATATTTGTTGAAATTGGAATGGGTCAAATGGATCACTATGAGAATGATTTTGAAGCAGCCATGCTGAAAGACACTTCTGCTTATTATTCTCGAAAGGCTTCAAATTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTTAAGGCTGAGGAATGCTTAAAACGAGAGAAAGATAGGGTTGCTCATTACTTGCACTCCAGTAGTGAGCCAAAGCTGTTGGAGAAAGTTCAACATGAGCTGTTATCTGTGTATGCAAATCAACTCCTTGAAAAAGAGCATTCTGGTTGTCATGCATTACTTAGGGATGACAAGGTTGAAGATTTGTCGAGGATGTTCAGGCTCTTTTCTAAAATACCTCGAGGCTTAGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACTGCTGAAGGTATGGCATTGGTGAAGCTGGCTGAAGATGCTGCTAGTAACAAAAAGGCAGAGAAGAAGGATATTATTGGTTTACAGGAGCAGGTTTTTGTTCGGAAGGTGATTGAGCTGCATGACAAGTACCTGGCCTATGTGAATGACTGTTTCCAGAATCACACTCTTTTCCACAAGGCTCTTAAGGAGGCTTTTGAGAACTTCTGCAACAAGGGTGTTGCTGGAAGCTCAAGTGCAGAACTACTTGCCACTTTTTGTGATAACATCCTGAAGAAAGGAGGAAGTGAAAAACTAAGTGATGAAGCAATCGAGGAAACTCTTGAAAAGGTTGTAAAGCTGCTGGCTTATATCAGTGACAAAGATTTGTTTGCTGAATTCTATAGGAAGAAGCTTGCTAGAAGACTTCTTTTTGACAAGAGTGCCAATGATGACCATGAGAGGAGCATTTTGACAAAATTGAAGCAACAATGTGGTGGTCAGTTTACGTCGAAGATGGAAGGAATGGTTACAGATTTGACACTGGCAAAGGAGAACCAAACAAGCTTTGAGGAGTATCTAAGCAATAATCCAAATGCAGATCCTGGAATTGACTTGACAGTTACAGTTCTAACTACTGGCTTCTGGCCAAGTTACAAGTCCTTTGACCTCAATCTTCCAGCAGAAATGGTTAGGTGTGTTGAAGTTTTCAAGGAATTTTATCAAACAAAAACTAAGCACAGAAAGCTTACATGGATTTACTCCTTGGGTACCTGCAATATAAGTGGAAAATTCGAACCAAAAACTATGGAACTAATTGTGACAACATACCAGGCTTCAGCATTGCTTCTATTTAATTCCTCGGATAGACTGAGTTATTCTGAGATAATGACTCAGTTAAACTTATCGGATGATGATGTTATTAGACTGCTGCATTCCTTGTCATGTGCAAAGTACAAGATTCTTAATAAGGAACCAAGCACAAAGACAATATCTTCTACTGATTATTTTGAATTCAATGCAAAATTTACGGACAAAATGAGGAGGATTAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTAATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAAGTTCTGAACTACCAACAGTTAGTTATGGAATGTGTCGAGCAGTTAGGTCGCATGTTTAAGCCTGATGTCAAGGCGATTAAAAAGCGGATTGAAGATTTGATATCTCGAGACTACTTGGAAAGAGACAAAGATAATGCAAATTTGTTCAGAAATTGGTTCCTCCTTATGATTATTCGTTGGAGAAAGGAGCTGGAGTACTTGTACATTTTGCCTCCATATCCAGTTCCATCTGATGACTTTGTCAATGCCTGTCTGTTAATTATTCCTCCAACCCATGAAGGAAATAGGAATCATGTAACACTAGTTTCAATGAAATTCTATTTTGATTGTCGGTTTAGAAACCATCAAATGAATGGATATGTCGTTGGAATCCAGACCTACAGCTGTGGGTTATGGGTCTCCACTTTGATTGTTTATATCATATTTCAGATCGACATTTACATGTTTGTCGTGTAG 2529 0.3926 MSMSERKTIDLEQGWDFMQKGIMKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYKEAFEEYILSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFEAAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVTAEGMALVKLAEDAASNKKAEKKDIIGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFENFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVRCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVIRLLHSLSCAKYKILNKEPSTKTISSTDYFEFNAKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFRNWFLLMIIRWRKELEYLYILPPYPVPSDDFVNACLLIIPPTHEGNRNHVTLVSMKFYFDCRFRNHQMNGYVVGIQTYSCGLWVSTLIVYIIFQIDIYMFVV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01035 842 SMART Cullin_Nedd8_2 671 738 IPR019559 -
Adu04g01035 842 Gene3D Cullin Repeats 390 503 - -
Adu04g01035 842 Pfam Cullin protein neddylation domain 674 736 IPR019559 -
Adu04g01035 842 Gene3D Cullin Repeats 267 389 - -
Adu04g01035 842 Pfam Cullin family 26 647 IPR001373 GO:0006511|GO:0031625
Adu04g01035 842 Gene3D - 661 740 IPR036388 -
Adu04g01035 842 PANTHER CULLIN 2 741 IPR045093 -
Adu04g01035 842 SMART cul_2 420 569 IPR016158 -
Adu04g01035 842 Gene3D Cullin Repeats 3 141 - -
Adu04g01035 842 ProSiteProfiles Cullin family profile. 389 619 IPR016158 -
Adu04g01035 842 SUPERFAMILY Cullin repeat-like 11 384 IPR016159 -
Adu04g01035 842 Coils Coil 322 342 - -
Adu04g01035 842 SUPERFAMILY Cullin homology domain 388 657 IPR036317 -
Adu04g01035 842 SUPERFAMILY "Winged helix" DNA-binding domain 659 740 IPR036390 -
Adu04g01035 842 PANTHER CULLIN 3B 2 741 - -
Adu04g01035 842 Gene3D Cullin Repeats 142 264 - -
Adu04g01035 842 Gene3D Cullin; Chain C, Domain 2 507 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01035 Adu-Chr4 18813674 18821061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01035 K03347 - aprc:113853141 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01035 04 18813674 18821061 Adu04g01035 04 18813674 18821061 ECH
Adu01g02664 01 96033131 96042716 Adu04g01035 04 18813674 18821061 PCT