Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00924 ATGGGTGTTCACACTTTTGAAGAGGAGTCAACCTCACCGGTGCCTCCAGCAAAACTATTCAAAGCCACCGTGGTAGACGGCGATGAACTCACCCCAAAGCTGATTCCGGCAATCCAGAGTATTGAGATCGTTGAAGGAAACGGAGGCCCTGGAACTGTCAAGAAGGTTACCGCTGTTGAAGATGGGAAAACTAGTTATGTGCTACACAAGATTGATGCAATTGATGAGGCTACCTACACATATGACTACACAATATCCGGAGGAACAGGGTTCCAAGAGATCTTAGAGAAAGTTTCATTCAAGACAAAGCTTGAGGCTGCTGATGGTGGATCCAAAATCAAGGTCTCTGTTACATTCCACACCAAGGGTGATGCTCCTCTCCCTGATGAAGTTCATCAAGATGTCAAACAAAAGAGCCAAGGAATCTTCAAGGCTATTGAGGGTTATGTTTTGTCCAACTAG 462 0.4545 MGVHTFEEESTSPVPPAKLFKATVVDGDELTPKLIPAIQSIEIVEGNGGPGTVKKVTAVEDGKTSYVLHKIDAIDEATYTYDYTISGGTGFQEILEKVSFKTKLEAADGGSKIKVSVTFHTKGDAPLPDEVHQDVKQKSQGIFKAIEGYVLSN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 Gene3D - 2 153 IPR023393 -
Adu04g00924 153 PANTHER ABA-RESPONSIVE PROTEIN 1 153 - -
Adu04g00924 153 SUPERFAMILY Bet v1-like 2 153 - -
Adu04g00924 153 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Adu04g00924 153 CDD Bet_v1-like 5 150 - -
Adu04g00924 153 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Adu04g00924 153 PANTHER - 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00924 Adu-Chr4 14842042 14844484 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00924 - - gmx:100305867 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00924 04 14842042 14844484 Adu04g00924 04 14842042 14844484 ECH
Adu01g02606 01 95358568 95359419 Adu04g00924 04 14842042 14844484 PCT