Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00103 ATGGCCTCTTCTACTCCGTTATTCTCTACCACCTTCTTCTCTCTCCTTCTCCTTCACTTCCTACCAGGTTCGTATTCCGCAACATTCACCATCGTTAATAAGTGCAGCTACCTGGTGTGGCCCGGAATTCTTTCCAACGCCGGAACTCCCCCACTTTCAACTACCGGTTTCGCCCTCCAGCCGGGGGAGTCCAACGCCGTCACCGCCCCCGCAGGCTGGTCCGGCCGCCTGTGGGGTCGCACCCTCTGCTCCCAGGATTCCAGCGGCAAGTTCTCGTGCGTGACCGGGGACTGCGGCTCCTCCGCCGTAGAATGCGGGGGAGGAGGTGCCGCCCCACCCGCCACCCTCGCGGAGTTCACTCTGAACGGAGCGGGGGGGATAGACTTCTACGACGTGAGCCTGGTGGACGGTTACAACCTTCCGATGACAGTGGAGCCGCAGGGGGGCACGGGGGGAGGGAACTGCACGTCAACGGGCTGCGAGGTGGATCTGAACGGGGATTGTCCGTCGGAGCTGAAAGTGACGTACGCCGCAAGTGGGGGAGAAGAAGGGGTGGCGTGCAAGAGCGCGTGCGAAGCATTCGGGGAGGCAGAGTACTGCTGCAGCGGAGCGTACGCGACCCCTGATACGTGCAAACCGAGCCAGTACTCGGAATTGTTCAAGGCGGCGTGCCCACGCGCCTACAGTTACGCGTACGACGATGGGACGAGCACCTTCACCTGTTCGTCTGCGGATTACGTGGTCACATTCTGCGCTGGCCCCACCACAAGTGTAATGAAGTCAGGAAAGGAGAAATACGCAGAGGCGGCGGATGAATCAGGGGGACAGGGCGGTGGCGGAGGTTGGTGGAGGATGCTATGGGTGGTAGTTGGATCGTTGGCATTTAGGATGTTGAGTTAG 900 0.6078 MASSTPLFSTTFFSLLLLHFLPGSYSATFTIVNKCSYLVWPGILSNAGTPPLSTTGFALQPGESNAVTAPAGWSGRLWGRTLCSQDSSGKFSCVTGDCGSSAVECGGGGAAPPATLAEFTLNGAGGIDFYDVSLVDGYNLPMTVEPQGGTGGGNCTSTGCEVDLNGDCPSELKVTYAASGGEEGVACKSACEAFGEAEYCCSGAYATPDTCKPSQYSELFKAACPRAYSYAYDDGTSTFTCSSADYVVTFCAGPTTSVMKSGKEKYAEAADESGGQGGGGGWWRMLWVVVGSLAFRMLS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00103 299 FunFam THAUMATIN-LIKE PROTEIN 1 27 252 - -
Accr9g00103 299 ProSiteProfiles Thaumatin family profile. 26 251 IPR001938 -
Accr9g00103 299 Pfam Thaumatin family 33 251 IPR001938 -
Accr9g00103 299 PRINTS Pathogenesis-related protein signature 242 251 IPR001938 -
Accr9g00103 299 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Accr9g00103 299 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Accr9g00103 299 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Accr9g00103 299 Gene3D Thaumatin 27 252 IPR037176 -
Accr9g00103 299 PIRSF PR5 1 276 IPR001938 -
Accr9g00103 299 CDD TLP-PA 28 251 - -
Accr9g00103 299 SMART tha2 29 252 IPR001938 -
Accr9g00103 299 SUPERFAMILY Osmotin, thaumatin-like protein 27 252 IPR037176 -
Accr9g00103 299 PANTHER OS03G0233200 PROTEIN 12 251 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00103 Accr-Chr9 1181516 1182719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00103 8 291 Receptor kinase-like Gene Family AT5G38280 48.951 4.12e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00103 - - gmx:100807106 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00103 9 1181516 1182719 Accr9g00103 9 1181516 1182719 ECH
Accr10g00704 10 20424202 20426717 Accr9g00103 9 1181516 1182719 ECH
Accr1g01850 1 48907385 48910341 Accr9g00103 9 1181516 1182719 ECH