Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01850 ATGGGACGCTGCCTTCTTTGCTTCCTCCTTATTCTCATCTTTCTTGCATTTCCTTTCCTATCGGAGGTGCATTCGGCATCTTTCAAGATTGTGAATAAGTGTCGCCACACGATTTGGCCGGGTTTGCTCTCTGGCGCCACTTCTCCACAGCTTTCCACTACTGGATTCGCTCTTCAAAGTGGCAAGTCCAACACTATAACGGTCCCGAAATCTTGGTCGGGTCGGATATGGGCTCGAACTCTTTGTGGTCAAGATTCTGACGGAAAGTTCTCCTGCCTCACTGCAGACTGCGGCTCCGGTCAAGTACAGTGTGCCGGTGGAGCTAAGCCACCCGCCACGTTGGCTGAGTTCACTCTCAACGGCGCCGACGGGTTAGATTTCTACGACGTGAGCTTGGTCGATGGGTACAACCTGCCGATGTTGATCGTTGCAAAAGGAGGAAAACGGGGTGGATGTAGCGCCACCGGATGTTTGGTCGACCTGAACGGAGCATGTCCGGCTGATCTAAGGGTGGCGCGTGGGAACGGGACCGGTACTGGTGGTGATAGCATGGCTTGCAGGAGCGCGTGTGAGGCCTTTGGTGATCCGCAGTATTGTTGCAGTGAGGCGTACGCCACGCCTGACACGTGTCATCCATCAGTTTATTCGCAATTCTTCAAGCACGCTTGCCCCCGCGCGTATAGTTACGCTTATGATGACAAGACAAGCACATACACCTGTGCTTCGGCTGACTACTTGATCATATTCTGCCCCTTGCCCTACACCAGCCAGAAGTTGCTGGGAGCACGAAAAGATGGGGCACCACTTCCCCTTGTAAACAAAACCATGATGTACTTGAAGCATTCAGGAGTTTCTTCATCAACAGATAGGATAGCTGAACCAAAGTAG 888 0.5248 MGRCLLCFLLILIFLAFPFLSEVHSASFKIVNKCRHTIWPGLLSGATSPQLSTTGFALQSGKSNTITVPKSWSGRIWARTLCGQDSDGKFSCLTADCGSGQVQCAGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGKRGGCSATGCLVDLNGACPADLRVARGNGTGTGGDSMACRSACEAFGDPQYCCSEAYATPDTCHPSVYSQFFKHACPRAYSYAYDDKTSTYTCASADYLIIFCPLPYTSQKLLGARKDGAPLPLVNKTMMYLKHSGVSSSTDRIAEPK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01850 295 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Accr1g01850 295 Pfam Thaumatin family 32 251 IPR001938 -
Accr1g01850 295 PANTHER OS03G0233200 PROTEIN 12 251 IPR001938 -
Accr1g01850 295 CDD TLP-PA 27 250 - -
Accr1g01850 295 PIRSF PR5 1 289 IPR001938 -
Accr1g01850 295 Gene3D Thaumatin 26 251 IPR037176 -
Accr1g01850 295 FunFam THAUMATIN-LIKE PROTEIN 1 26 251 - -
Accr1g01850 295 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Accr1g01850 295 SMART tha2 28 251 IPR001938 -
Accr1g01850 295 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Accr1g01850 295 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Accr1g01850 295 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Accr1g01850 295 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Accr1g01850 295 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Accr1g01850 295 ProSiteProfiles Thaumatin family profile. 25 251 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01850 Accr-Chr1 48907385 48910341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01850 6 251 Receptor kinase-like Gene Family AT5G38280 48.996 1.38e-80 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01850 - - ccaj:109798931 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01850 1 48907385 48910341 Accr1g01850 1 48907385 48910341 ECH
Accr1g01850 1 48907385 48910341 Accr10g00704 10 20424202 20426717 ECH
Accr1g01850 1 48907385 48910341 Accr9g00103 9 1181516 1182719 ECH