Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00704 ATGGCTCTGTTATCTGACCACCAACATTCTTCTGAAATGGCCTTCGTTTTCGTCCTTCTTCTTGTTCTTGAAGGAGTTTCAGGGGCTACATTTACGTTTGTGAACAAGTGTGATTACACAGTATGGCCGGGAGTATTGGGAAAGCCTGACCTGGGAACCACAGGATTCGAGCTCTCCAAGGGAAGTTCTCGAAGTTTCCAGGCTCCACCTGGTTGGTCCGGTAGATTCTGGGCAAGAACTAACTGCAAATTCGACGATTCTGGTCACGGAACATGCGCTACTGGCGACTGCGGATCCGGCGGTGTCGCCTGCAATGGCGCCAGTGCTTCCCCTCCGGCGACGCTGGCGGAGTTCACGATCGACCCGGCGGGCTCGAAAGACTTCTACGACGTCAGCCTCGTCGATGGCTATAATCTGCCGATGATGGTGGAAGCGAACGGAGGGTCAGGATCATGCGCAACCACTGGATGTGCGGCGGATCTCATCAGGCGCTGCCCGTCGGAATTGAAGGCAGACGGCGGTGACGCCTGTAAGAGTGCTTGTGACGCGTTTGGGAAACCGGAATATTGCTGCAACGGCGATTTCGGTTCGCCGTCCACTTGCAGGCCGTCGATGTATTCGGAGATTTTCAAATCGGTGTGTCCCAAGGCGTATAGCTACGCCTATGATGATAAGACGAGTACCTTTACTTGCGCCGGAGCTGACTATACTATAACATTTTGTCCTTCTTCTTCCCCAAGTCTGAAATCGGCATCAATAGGGGTTGACGCACAACAGTCAGTGGAACAAGCAGCCGTGGCAACTTCTTCTTGGATTGCAAATTTAGCTACTAGCCATTCCACTTCACTTCACCCTTCAATCTCTCTTCTTCTTCTTCTGCCTCTTATTCTCATTGTTTCCTTCAGTTAA 909 0.5171 MALLSDHQHSSEMAFVFVLLLVLEGVSGATFTFVNKCDYTVWPGVLGKPDLGTTGFELSKGSSRSFQAPPGWSGRFWARTNCKFDDSGHGTCATGDCGSGGVACNGASASPPATLAEFTIDPAGSKDFYDVSLVDGYNLPMMVEANGGSGSCATTGCAADLIRRCPSELKADGGDACKSACDAFGKPEYCCNGDFGSPSTCRPSMYSEIFKSVCPKAYSYAYDDKTSTFTCAGADYTITFCPSSSPSLKSASIGVDAQQSVEQAAVATSSWIANLATSHSTSLHPSISLLLLLPLILIVSFS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00704 302 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Accr10g00704 302 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Accr10g00704 302 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Accr10g00704 302 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Accr10g00704 302 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Accr10g00704 302 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Accr10g00704 302 PIRSF PR5 2 288 IPR001938 -
Accr10g00704 302 SMART tha2 31 242 IPR001938 -
Accr10g00704 302 Pfam Thaumatin family 35 242 IPR001938 -
Accr10g00704 302 SUPERFAMILY Osmotin, thaumatin-like protein 29 243 IPR037176 -
Accr10g00704 302 ProSiteProfiles Thaumatin family profile. 28 242 IPR001938 -
Accr10g00704 302 CDD TLP-PA 30 241 - -
Accr10g00704 302 Gene3D Thaumatin 29 242 IPR037176 -
Accr10g00704 302 FunFam THAUMATIN-LIKE PROTEIN 1 29 242 - -
Accr10g00704 302 PANTHER OS03G0233200 PROTEIN 16 242 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00704 Accr-Chr10 20424202 20426717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00704 13 283 Receptor kinase-like Gene Family AT5G38280 44.170 6.14e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00704 - - qsa:O6P43_024878 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00704 10 20424202 20426717 Accr10g00704 10 20424202 20426717 ECH
Accr10g00704 10 20424202 20426717 Accr9g00103 9 1181516 1182719 ECH
Accr1g01850 1 48907385 48910341 Accr10g00704 10 20424202 20426717 ECH