Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2390 ATGGCTCTGTTCTTATCTTACTTTCTGCATTTTCCTCATTTATTGCTCGTCAGTTTCTTCATTTTTCCCTTTCTCAAAGGAACTTCGGGCGCTACATTTACGTTTGTGAATAAGTGTGATTACACGGTATGGCCGGGAATTCTTGGAAAACCAGACATCGGAAGTACGGGATTCGAGCTGGCAAAAGGGAGCTCTAAAAGCTTCCAAGCCCCTCCGGGTTGGTCTGGAAGATTCTGGGCCCGAACCGACTGCAAATTCGATGACTCCGGCCACGGAACTTGTGCCACCGGCGATTGCGGCTCAGGCCAAATGCTGTGCAACGGTGCCGGAGCCACGCCTCCGGCGACCTTGGCCGAGTTCACCCTCGGCTCATCCGGCTCTCAGGACTACTACGACGTCAGCCTCGTCGATGGCTTCAATCTGCCGATGGCAGTGCAAGCGAGCGGAGGCTCCGGATCCTGTTCGAGCACAGGTTGCGTGGCGGATCTAAACCGGCGGTGTCCGTCGGAGCTGAGGGTAGAGGGCGGCGACGCCTGTAACAGTGCATGCAGGGCGTTTGGGAAGCCAGAGTTTTGCTGTAACGGGGATTATGGGTCACCGTCGACGTGTAAACCGTCGATGTACTCGGTGATGTTCAAGTCGGCGTGCCCGAAATCGTATAGTTACGCATTCGACGATGCCACCAGCACCTTTACTTGTACAGCCGGCGACTATACAGTCAAATTCTGTCCTCCTTCCCCAAGCCTTAAGTCTACTGGTTCGTCGCCGACGGGGATAGATCCGTCTTCGGGATCATCGTCAGAGGAAGAAGGTGCTCTGGCTTCTACTTCATGGCTAGCAAACATGGCAACAGGGGCTTCCACCAGGAATCATGATGGAGGAGCTAGAAATTTTGCAATTTTTGGGGCTCTTAGTGTCATTCTTTCCTTTTTAGTGTTGTAG 942 0.5329 MALFLSYFLHFPHLLLVSFFIFPFLKGTSGATFTFVNKCDYTVWPGILGKPDIGSTGFELAKGSSKSFQAPPGWSGRFWARTDCKFDDSGHGTCATGDCGSGQMLCNGAGATPPATLAEFTLGSSGSQDYYDVSLVDGFNLPMAVQASGGSGSCSSTGCVADLNRRCPSELRVEGGDACNSACRAFGKPEFCCNGDYGSPSTCKPSMYSVMFKSACPKSYSYAFDDATSTFTCTAGDYTVKFCPPSPSLKSTGSSPTGIDPSSGSSSEEEGALASTSWLANMATGASTRNHDGGARNFAIFGALSVILSFLVL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2390 313 Gene3D Thaumatin 31 244 IPR037176 -
Acco11g2390 313 ProSiteProfiles Thaumatin family profile. 30 244 IPR001938 -
Acco11g2390 313 MobiDBLite consensus disorder prediction 248 269 - -
Acco11g2390 313 PANTHER OS03G0233200 PROTEIN 19 244 IPR001938 -
Acco11g2390 313 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Acco11g2390 313 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Acco11g2390 313 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Acco11g2390 313 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Acco11g2390 313 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Acco11g2390 313 CDD TLP-PA 32 243 - -
Acco11g2390 313 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Acco11g2390 313 Pfam Thaumatin family 37 244 IPR001938 -
Acco11g2390 313 FunFam THAUMATIN-LIKE PROTEIN 1 31 244 - -
Acco11g2390 313 SMART tha2 33 244 IPR001938 -
Acco11g2390 313 SUPERFAMILY Osmotin, thaumatin-like protein 31 245 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2390 Acco-ChrAcco11 37200455 37201650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2390 14 287 Receptor kinase-like Gene Family AT5G38280 44.755 3.82e-78 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2390 11 37200455 37201650 Acco11g2390 11 37200455 37201650 ECH
Acco12g1353 12 19260113 19262302 Acco11g2390 11 37200455 37201650 ECH
Acco01g2139 01 37299419 37302564 Acco11g2390 11 37200455 37201650 ECH