Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3410 ATGGCGACTCGGAACCTTGAGAAAATGGCTTCAATTGATGCTCAATTGAGGTTACTGGCACCTGCGAAGGTGTCCGATGATGACAAGTTGGTCGAGTACGATGCTCTGTTGCTGGATCGCTTCCTTGACATTCTTCAGGATTTACACGGCGAAGACATCAGAGAAACGGTCCAAGAGTGTTATGAGAGGTCAGCTGAGTACGAAGGGAAGCATGACACTCACAAGTTGGAGGAACTTGGGAATATGCTGACGGGGCTTGATGCTGGGGACTCCATTGTTATTGCCAAATCATTTTCTCACATGCTTAATCTGGCCAATTTGGCGGAGGAGGTTCAGATTGCGTATAGAAGAAGGATCAAGTTGTTGAAGAAGGGTGATTTTGCGGATGAGAACTCTGCCATCACTGAATCAGACATTGAAGAGACCTTCAAGAGGCTTGTGACCCAATTAAAAAAGACCCCAGAGCAAGTCTTTGATGCTTTGAAGAGCCAGACTGTTGATTTGGTCTTAACTGCTCACCCTACTCAGTCTGTTCGTAGATCTCTGCTCCAAAAGCATGGGAGGATAAGGGATTGTTTGACTCAGTTATATGCTAAAGACATAACACCTGATGATAAGCAGGAACTTGACGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGTACAGATGAAATTCGAAGGACTCCTCCTACCCCACAAGATGAGATGAGGGCAGGAATGAGTTACTTCCATGAGACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGCCGGATTGACACAGCTTTGAAGAACATGGGAATAAATGAACGTGTCCCATATAATGCTCCTGTCATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGGAACCCCAGAGTAACACCTGAGGTTACAAGGGACGTATGCTTATTGGCCAGAATGATGGCTGCTAATTTATATTTCTCTCAAATTGAGGATCTCATGTTTGAGTTGTCCATGTGGCGGTGCAATGATGAGCTTCGTGTTCGCGCTGATCAACTCCATGCGTCGTCTAAGAGAGATGCTAAACATTATATTGAGTTTTGGAAACAGATTCCCCCAAATGAGCCATATCGTGTTATTCTAGGTGATGTGAGGGACAAGTTATACAATACACGTGAACGTGCTCGCCACTTATTAGCCCACGGAAACTCTGACGTCCCTGAAGAGACAACCTTCACAAATGTTGACCAGTTCTTGGAGCCTCTGGAGCTCTGCTATAGGTCACTCTGTGCTTGTGGTGACCGTGCGATTGCTGATGGAAGCCTCCTTGATTTCCTGAGGCAAGTTTCTACATTTGGACTCTCGCTTGTAAGACTTGACATCCGTCAAGAATCGGACAGGCACACTGATGTCATGAATGCAATCACGCAACATTTGGAGATTGGATCTTACCGAGAATGGTCCGAGGAACGCAGGCAAGAATGGCTCTTGTCTGAACTCAGTGGCAAGCGCCCCCTCTTTGGCCCTGACCTTCCCAAAACCGAGGAAATTGCCGATGTTTTAGAAACCTTCCATGTCATTTCAGAGCTTCCCCCAGACAGCTTCGGAGCCTACATCATCTCAATGGCAACAGCACCATCTGATGTGCTTGCCGTAGAACTTCTCCAACGTGAATGCCATGTGAAAGAGCCATTAAGAGTTGTCCCTTTGTTTGAAAAGCTCGGTGATCTTGAAGGTGCACCGGCTGCAGTAGCTCGTCTATTCTCAATTGATTGGTACAGAAACAGGATCAATGGAAAGCAAGAAGTTATGATTGGATACTCAGATTCAGGTAAAGATGCTGGACGCCTTTCAGCAGCTTGGGCACTGTACAAAGCTCAAGAAGAACTTATAAAGGTTGCCAAGGAGTTTGGTGTGAAGCTTACAATGTTCCATGGAAGAGGAGGGACTGTTGGAAGAGGAGGAGGTCCTACTCATCTTGCTATATTGTCTCAGCCTCCAGAGACAATTCATGGGTCTCTTCGTGTCACTGTCCAAGGTGAAGTTATTGAACAGTCTTTTGGAGAGGAGCACTTGTGCTTTAGGACACTTCAGCGCTTTACTGCTGCTACACTTGAGCATGGAATGCACCCTCCCGTGTCACCGAAACCAGAATGGCGTGCTCTCATGGATGAGATAGCAGTCATCGCCACGAAGGAGTATCGTTCCATTGTTTTCCAGGAGCCCCACTTTGTTGAATACTTCAGAAGTGCTACACCCGAGTTGGAGTATGGAAGAATGAACATTGGGAGTCGTCCAGCAAAAAGAAAACCAAGTGGAGGGATTGAATCACTGCGGGCTATCCCATGGATATTTGCATGGACACAGACAAGGTTCCATTTACCAGTATGGCTTGGTTTTGGTGCAGCATTTAAGCATGCCATTGAGAAGGATCCTAGGAATCTCCAAATGCTTCGAGATATGTACAATCAGTGGCCATTCTTCAGGGTCACTCTTGACTTGGTTGAGATGGTGTTCGCCAAGGGAGACCCAGGAATTGCTGCACTTTATGATAAACTCTTAGTCTCAGGGGACCTATTGTCATTTGGAGAGCGTCTAAGGGATAAATATGAAGAAACCAAGAGTTTCCTCCTCCAGATTGCGGGGCATAAAGATCTTCTTGAAGGGGACCCGTACCTGAAGCAAAGACTTCGTCTTCGTGATTCATACATCACAACCCTGAACGTGTTGCAGGCTTACACACTAAAGAGAATACGTGATCCAGACTACCATGTGAAGTTGAGGCCACACTTATCGAAGGAGTATATGGAATCAAGCAAGTCAGCAGCTGAACTTGTCAAGCTCAACCCTAAGAGCGAGTATGCTCCTGGGCTTGAGGATACCCTTATTTTGACCATGAAGGGCATTGCTGCTGGCATGCAGAACACTGGCTAA 2901 0.4636 MATRNLEKMASIDAQLRLLAPAKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYERSAEYEGKHDTHKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVTQLKKTPEQVFDALKSQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRIDTALKNMGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADQLHASSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARHLLAHGNSDVPEETTFTNVDQFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMNAITQHLEIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVISELPPDSFGAYIISMATAPSDVLAVELLQRECHVKEPLRVVPLFEKLGDLEGAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELIKVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALMDEIAVIATKEYRSIVFQEPHFVEYFRSATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHAIEKDPRNLQMLRDMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSGDLLSFGERLRDKYEETKSFLLQIAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKEYMESSKSAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3410 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Acco01g3410 966 FunFam Phosphoenolpyruvate carboxylase 1 309 444 - -
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 281 296 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 Pfam Phosphoenolpyruvate carboxylase 36 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Acco01g3410 966 Gene3D Phosphoenolpyruvate/pyruvate domain 309 444 - -
Acco01g3410 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
Acco01g3410 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3410 Acco-ChrAcco01 51100406 51104832 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3410 01 51100406 51104832 Acco08g0830 08 7434762 7438562 CCT
Acco08g1145 08 11733062 11744210 Acco01g3410 01 51100406 51104832 CCT
Acco01g3410 01 51100406 51104832 Acco01g3410 01 51100406 51104832 ECH