Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0830 ATGACGACGACGACGACGACGACGACTAGGAACATTGAGAAGATCGGTTCCATTGATGCTCAGCTGAGGTTGCTGGCGCCGAGAAAGGTGTCTGATGATGATAAGCTTGTCGAGTATGATGCTTTGTTGATGGACCGATTCCTCGACATTCTTCAGGATCTTCACGGTGAAGACATCAGAGAAACGGTTCAAGATTGCTATGAGCTGTCAGCCGTATATGAAGGGGAGCATGACCCTGACAAGTTGGAGGAGCTTGGGAACAAGCTGACTGCTCTTGACGCCGGCGACTCTATCGTGGTGGCCAAATCATTTTCTCACATGCTCAATTTGGCCAACTTGGCCGAGGAAGTCCAAATTGCCTACCGAAGAAGGATCAAGTTATTAAAGAAGGGTGATTTCGCGGACGAGAACTTGGCCATAACCGAATCTGACATCGACGAGACCTTCAAAAGGCTCGTCAATCAACTGAACAAGACCCCTCATGAAGTGTTTGAGGCTTTGAAGAACCAGACCGTAGATTTGGTCCTCACAGCTCATCCTACCCAGGCTATTCGTAGATCTCTGCTTCAAAAGCATTCCAGGATAAGGAGTTGCTTAGCTCAATTGTATGCTAAGGATATAACACTTGATGATAAGAAGGAACTTGACGAGGCCTTACAAAGAGAGATTCAAGCTGCATTTCGTACGGATGAAATCAGGAGGAGTCCTCCTACGCCTCAAGACGAGATGAGGGCAGGAATGAGCTACTTTCATGAAACAATCTGGAAAGGTGTGCCAAAGTTTTTGCGCCGGCTCGACACAGCTCTCAAGAACATTGGAATAACTGAACGTGTGCCATATAATGCCCCTGTTATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGAAACCCCAGAGTAACCCCAGAAGTTACAAGAGATGTTTGCTTGTTGGCTAGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAAGACCTTATGTTTGAGTTGTCTATGTGGCGTTGCAACGACGAGCTCCGTGTTCGTGCTGATAAACTCCATAGCTCATCAAAGAGAGATGCAAAACATTTTATAGAGTTTTGGAAGCAGATCCCTCCTAATGAACCATATCGTGTTATCCTCGGTGATGTGAGAGACAAACTATATAATACTCGTGAACGCGCACGCCAAATATTAGCTGATGGGACCTCTGACATCCCTGAGGAGACAACCTTCACAAATGTTGAGCAGTTCATGGAGCCTCTTGAACTCTGCTATAGGTCACTTTGTGAATGTGGTGACAGATCAATAGCTGATGGAAGCCTCCTTGATTTCTTACGGCAAGTTTCAACTTTTGGACTGTCACTTGTAAGGCTTGACATTCGTCAAGAATCAGACAGGCACACTGATGTCATGGATGCAATAACAAGGCACTTGGATATCGGTTCTTACCGAGAATGGAGTGAGGAACGCCGCCAGAAATGGCTCTTGTCTGAACTCAGCGGCAAGCGTCCTCTCTTTGGCCATGATCTTCCTAAAACTGAAGAAATCTCTGATGTGTTAGAAACCTTGCGTGTCATCTCAGAACTTCCAGCAGACAATTTTGGTGCCTACATCATCTCAATGGCAACATCTCCATCTGATGTGCTTGCTGTAGAGCTTTTACAACGAGAATGCCAAGTGAAAAAGCCATTAAGGGTTGTCCCATTGTTTGAAAAACTCGCTGATCTTGAGACTGCTCCGGCTGCTGTCGCTCGTCTTTTCTCCATAGATTGGTACAGAAGCCGAATTAACGGGAAGCAAGAAGTCATGATAGGATACTCAGACTCAGGGAAGGACGCTGGCCGCCTTTCTGCGACTTGGGCGCTATACAAAGCTCAAGAAGAGCTCATAAAGGTTTCAAAGAAGTTTGGCATTAAGCTTACAATGTTCCATGGCAGGGGAGGAACTGTTGGAAGAGGAGGGGGTCCTACTCATCTTGCAATACTATCTCAGCCGCCAGAGACCATTCATGGATCACTTCGAGTAACGGTTCAAGGTGAAGTCATTGAGCAGTCATTTGGGGAACAACACTTGTGCTTTAGGACACTTGAAAGATTCACTGCCGCTACATTAGAGCATGGAATGAATCCTCCTGTCTCCCCAAAACCAGAATGGCGAGCTCTCATGGACGAAATGGCAGTTATTGCAACAAACGAGTATCGCTCTTTTGTTTTCCAAGAACCCCGTTTCGTCGAGTACTTCCGAAGCGCAACACCTGAGTTAGAGTATGGACGCATGAACATTGGAAGCCGACCTTCAAAAAGAAAGCCAAGCGGAGGAATTGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACAAGGTTTCACCTACCAGTATGGCTTGGCTTTGGTTCAGCATTCAAGCAAGTGATGGAGAAGGATTCCAAGAATCTCCAAATGCTTAGAGATATGTATAATCAATGGCCTTTCTTCAGAGTAACCCTTGACTTGATTGAGATGGTGTTTGCCAAAGGAGACCCAAGAATTGCTGCTTTATATGACAAACTCCTAGTGTCACCAGAACTAGAGCCACTTGGAGAGTGCTTGAGGTCTAAATATGAAGAAACCAAAAGCCTTCTTCTCCAGATTGCTGGGCACAGACATGTCCTTGAGGGAGACCCTTACTTGAAGCAAAGACTCAGGCTTCGTGATTCGTACACGACGGCTCTGAATGTGTTGCAAGCTTACACGTTGAAGAGAATCCGTGATCCAGACTACCATGTGAAGCTGAGGCCGCATTTATCAAAGGAGTACATGGAATCAAGCAAACCAGCTGCAGAACTTCTGAAACTGAACCCAACAAGCGAGTATGCTCCTGGTTTGGAGGACACTCTCATTTTGACCATGAAGGGTGTTGCTGCTGGCATGCAAAACACTGGCTAA 2919 0.4597 MTTTTTTTTRNIEKIGSIDAQLRLLAPRKVSDDDKLVEYDALLMDRFLDILQDLHGEDIRETVQDCYELSAVYEGEHDPDKLEELGNKLTALDAGDSIVVAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENLAITESDIDETFKRLVNQLNKTPHEVFEALKNQTVDLVLTAHPTQAIRRSLLQKHSRIRSCLAQLYAKDITLDDKKELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRLDTALKNIGITERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADKLHSSSKRDAKHFIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQILADGTSDIPEETTFTNVEQFMEPLELCYRSLCECGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITRHLDIGSYREWSEERRQKWLLSELSGKRPLFGHDLPKTEEISDVLETLRVISELPADNFGAYIISMATSPSDVLAVELLQRECQVKKPLRVVPLFEKLADLETAPAAVARLFSIDWYRSRINGKQEVMIGYSDSGKDAGRLSATWALYKAQEELIKVSKKFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLERFTAATLEHGMNPPVSPKPEWRALMDEMAVIATNEYRSFVFQEPRFVEYFRSATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKQVMEKDSKNLQMLRDMYNQWPFFRVTLDLIEMVFAKGDPRIAALYDKLLVSPELEPLGECLRSKYEETKSLLLQIAGHRHVLEGDPYLKQRLRLRDSYTTALNVLQAYTLKRIRDPDYHVKLRPHLSKEYMESSKPAAELLKLNPTSEYAPGLEDTLILTMKGVAAGMQNTG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0830 972 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 972 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 598 610 IPR033129 -
Acco08g0830 972 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 39 972 IPR015813 GO:0003824
Acco08g0830 972 Pfam Phosphoenolpyruvate carboxylase 43 972 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 FunFam Phosphoenolpyruvate carboxylase 1 315 450 - -
Acco08g0830 972 Gene3D Phosphoenolpyruvate/pyruvate domain 315 450 - -
Acco08g0830 972 Hamap Phosphoenolpyruvate carboxylase [ppc]. 29 972 IPR022805 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 175 186 IPR018129 -
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 287 302 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 638 667 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 596 616 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 227 243 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 447 467 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 770 796 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g0830 972 PRINTS Phosphoenolpyruvate carboxylase signature 174 187 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0830 Acco-ChrAcco08 7434762 7438562 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3410 01 51100406 51104832 Acco08g0830 08 7434762 7438562 CCT
Acco08g0830 08 7434762 7438562 Acco08g0830 08 7434762 7438562 ECH