Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1145 ATGGCGAGCCGACCCTTGGAGAGGATGGTATCCATTGATGAACAGCTTCGTCAATTGGTTCCAGCCAAAGTGAGTGAAGATGATAAACTCGTTGAGTACGATGCTTTACTCATCGACAAATTCCTCCATATCCTCAACGATTTACATGGCCAACGTCTCACCCAAACGGTGCAAGCAGCATATGAGCTTTCAGCGGAGTACGAAGGGAAGCACGAGGCACAGAAACTGGAGGAACTGGGAAAACTGATAACAAGTTTGGACGCCGGCGACGCCATCGTGGTGGCCAAGTCATTCTCAAACATGCTTAATTTGGCTAACTTGGCGGAGGAGGTTCAAATTGCTCACCGGAGAAGGAACAAGCCCAAGAAGGGAAATTTCTCCGACGAGAATAGCGCCCTCACTGAATCTAACATCGAAGAGACTTTCCGGACACTTGTCGTCGAAATGAAGAAGTCGCCGGAAGAAATTTTTCATGAGCTCAAGAACCAGACTGTGGATCTTGTCCTCACTGCTCACCCCACTCAATCTGTTCGTAGATCTTTGCTTCAGAAATATGCAAGGATAAAGAATTTTTTATTTCAGTTTTACGCCGCAGATTCTCCTGATAATAAGAAGGAGCTCGGTGAGTCCCTACAGAGGGAGATTCAAGCTGCGTTTCGTACAGATGAAATAAAGAGGACGCCTCCAACACCACAAGACGAGATGAGAGCAGGAATGAGCTACTTTTATGAGACAATATGGACTGGTGTTCCCAGTTTTCTGCGCAGAGTTGATACTGCTTTGAACAACATTGGCATTACACAACGTGTTCCTTATGATGCTCCTCTCATTCAATTCTCTTCTTGGATGGGTGGTGATCGCGACGGTAATCCAAGGGTGACTCCTGAAGTGACTAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATAACCAAATTGAGGACCTTATGTTTGAGCTGTCAATGTGGCGTTGCAACGAGGAGTTGCGTGCTCATGCAGATGAAATTCACAGATCTGCCAAAAAGGATGATGTTGCAAAACACTATAAAGAGTTCTGGAAAAGAGTTCCCCTAAATGAACCATATCGTGTAATACTGGGCAACGTAAGGGACAAACTTTACCATACTCGCGAACGCTCTCGCCATTTGCTTGCTCAAGGTCACTCCGACATTCCCGAGGAATTAACTTACACTACTGTTGAAGAGTTCAAGCAACCTCTGGAACTCTGTTATAGATCACTATGTGATTGTGGAGATAGAGCTATAGCAGAAGGGAGTCTTCTTGATTTATTGAGGCAAATCACCACCTTTGGACTAGCAATGGTTAGGCTTGATATCAGACAAGAATCTGACCGACACAGTGACGTCATGGACGCCATTACTAAACACCTCGAGATTGGATCATACCATGAATGGTCCGAAGAAAAAAGACAAGAATGGCTTCTCTCTGAGTTAAGCGGCAAGCGTCCATTATTCGGTCCAGACCTTCCTCAAACCGATGAAGTTAAGGATGTCCTCGACACATTCCACGTCATCGTCGAGCTACCTCCTGGTAGCTTTGGCGCCTACATAATTTCCATGGCCACAGCGCCGTCCGACGTTCTCACGGTGGAGCTTCTCCAGAGAGAATGTCGTGTGAAGCATCCCTTAAGAGTCGTCCCGTTGTTCGAACGGCTCGCCGATTTAGAAGCTGCGCCGGCAGCATTAGCTCGGTTGTTCTCGTTGGATTGGTATAGGAACCGAATCAATGGGAAGCAAGAAGTTATGATCGGATACTCAGATTCCGGCAAAGATGCTGGAAGGTTCACGGCGGGGTGGCAGCTGTATAAGGCTCAAGAAGACCTTATAAAGGTGGCGAAGCAGTATAATATCAAGCTTACTATGTTCCATGGCCGTGGTGGCACCGTCGGGAGAGGCGGCGGACCGACGCATCTGGCAATATTGTCGCAGCCGCCGGATACGATTCATGGGTCGCTTAGAGTGACGGTGCAGGGAGAGGTCATAGAGCAATCGTTTGGAGAGAAGAATTTGTGCTTTAGAACGCTTCAACGTTTCACGGCGGCGACTTTGGAACATGGAATGCGTCCTCTGCTTTCGCCTAAACCAGAATGGCGAGCTCTCATGGATGAAATGGCCGCCATTGCTACTGAGGAATACCGTTCTATTGTGTTCAAGGAACCACGTTTTGTTGAGTATTTTCGCCTGGCGACACCAGAGTTGGAGTATGGAAGAATGAACATAGGAAGCAGACCAGCAAAGAGAAAGCCAAGCGGTGGGATAGAATCCTTAAGGGCAATCCCATGGATATTTGCATGGACACAAACAAGGTTTCATCTGCCAGTGTGGCTGGGCTTTGGGGAGGCATTCAAGCAAGCAATTGCCAAAGACAAAAATAATCTCAAGATGCTTCAAGAAATGTACAATCAATGGCCTTTCTTCAGAGTCACCATTGATTTGGTTGAAATGGTGTTCGCCAAAGGAGACCCAAGCATTGCAGCTCTCTATGATAAGCTCCTTGTTTATCCTGAGCTTTGGCCTTTTGGTGAGCAGTTAAGGGCTAAGTATGAAGAAACCGAGAATCTCCTCCTTCAGGTGGCTGGACACAAGGAAGTTTTGGAAGAGAGTCCATACTTGAGGCAAAGACTGAGACTGAGAGATTCGTACATAACAACCATAAATGTTTTGCAAGCATACACATTGAAGAGTGTGAGAGATCCAAACTATGCAAAGGAGCGTAATAAGATCTCAAAGGACTCAGCTGCAGATGAGGCAAGTAAAGCTGCATCTAATGAGCTTGTTGCTCTTAACCCCACAAGTGAATATGCTCCTGGTTTGGAAGATACCCTTATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAAAACACTGGTTAA 2907 0.4647 MASRPLERMVSIDEQLRQLVPAKVSEDDKLVEYDALLIDKFLHILNDLHGQRLTQTVQAAYELSAEYEGKHEAQKLEELGKLITSLDAGDAIVVAKSFSNMLNLANLAEEVQIAHRRRNKPKKGNFSDENSALTESNIEETFRTLVVEMKKSPEEIFHELKNQTVDLVLTAHPTQSVRRSLLQKYARIKNFLFQFYAADSPDNKKELGESLQREIQAAFRTDEIKRTPPTPQDEMRAGMSYFYETIWTGVPSFLRRVDTALNNIGITQRVPYDAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYNQIEDLMFELSMWRCNEELRAHADEIHRSAKKDDVAKHYKEFWKRVPLNEPYRVILGNVRDKLYHTRERSRHLLAQGHSDIPEELTYTTVEEFKQPLELCYRSLCDCGDRAIAEGSLLDLLRQITTFGLAMVRLDIRQESDRHSDVMDAITKHLEIGSYHEWSEEKRQEWLLSELSGKRPLFGPDLPQTDEVKDVLDTFHVIVELPPGSFGAYIISMATAPSDVLTVELLQRECRVKHPLRVVPLFERLADLEAAPAALARLFSLDWYRNRINGKQEVMIGYSDSGKDAGRFTAGWQLYKAQEDLIKVAKQYNIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEKNLCFRTLQRFTAATLEHGMRPLLSPKPEWRALMDEMAAIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKQAIAKDKNNLKMLQEMYNQWPFFRVTIDLVEMVFAKGDPSIAALYDKLLVYPELWPFGEQLRAKYEETENLLLQVAGHKEVLEESPYLRQRLRLRDSYITTINVLQAYTLKSVRDPNYAKERNKISKDSAADEASKAASNELVALNPTSEYAPGLEDTLILTMKGIAAGMQNTG 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1145 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Acco08g1145 968 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 968 IPR022805 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Acco08g1145 968 FunFam Phosphoenolpyruvate carboxylase 1 307 444 - -
Acco08g1145 968 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 16 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 Pfam Phosphoenolpyruvate carboxylase 37 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco08g1145 968 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 968 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1145 Acco-ChrAcco08 11733062 11744210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3213 01 49548438 49553840 Acco08g1145 08 11733062 11744210 CCT
Acco08g1145 08 11733062 11744210 Acco01g3410 01 51100406 51104832 CCT