Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
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Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000010 2069 3 14 11 0 20 238 9 4 158 17 90 18 1 16 1 1 1 0 0 40 3 2 124 26 21 11 123 4 4 3 2 115 5 41 0 7 14 10 2 0 0 28 49 196 0 0 15 64 21 29 31 56 105 92 216 8 0
OG0000011 1794 12 18 54 23 20 141 60 19 64 14 116 4 23 9 2 24 11 10 0 4 15 16 35 8 12 14 25 63 36 41 15 11 9 62 20 9 52 21 11 16 19 12 48 52 12 7 47 78 77 71 12 55 11 29 113 23 9
OG0000012 1765 33 29 17 10 7 82 38 24 45 18 40 28 6 32 9 30 10 13 11 0 15 25 44 3 5 30 16 14 32 66 65 59 36 92 26 12 92 9 22 15 57 24 41 97 20 13 16 41 61 44 23 12 8 63 47 30 8
OG0000013 1680 2 22 4 3 7 254 9 0 47 42 137 1 0 2 0 2 0 0 0 2 0 2 6 3 35 0 1 0 9 47 1 48 0 18 4 1 0 7 33 0 0 1 147 6 2 0 10 47 155 245 2 8 31 95 77 105 0
OG0000014 1673 0 0 1 7 0 0 1 1 0 0 0 0 0 0 1 3 0 0 1 124 0 18 0 216 129 0 44 0 0 203 2 120 0 51 9 8 0 69 2 0 1 10 0 7 9 1 5 23 112 267 0 54 5 0 169 0 0
OG0000015 1633 11 23 64 2 40 36 67 9 52 27 31 6 7 57 4 2 8 12 1 7 16 3 59 18 9 36 34 38 18 59 19 219 7 29 61 19 24 28 18 9 36 34 18 4 45 5 33 19 5 76 14 12 29 37 26 13 38
OG0000016 1623 19 25 19 33 21 60 24 21 26 26 44 6 43 5 17 18 8 11 15 2 20 29 44 8 11 24 21 35 22 41 38 193 34 51 18 17 46 14 17 9 24 27 22 23 24 20 18 44 94 34 12 22 26 26 40 20 12
OG0000017 1605 13 15 28 5 22 44 22 14 34 18 31 10 13 32 23 27 14 4 5 11 19 25 26 15 17 23 39 34 31 51 24 258 23 43 14 13 24 33 14 17 19 15 6 15 19 27 20 51 29 43 15 40 22 25 101 19 11
OG0000018 1591 0 3 25 0 3 25 22 0 16 10 30 2 0 2 2 2 0 0 0 1 0 0 69 5 82 254 7 0 0 157 0 87 0 27 0 5 0 0 10 0 0 2 78 17 0 0 5 54 164 109 18 7 22 28 194 47 0
OG0000019 1557 23 30 23 15 12 50 33 18 48 22 25 31 37 65 13 23 31 15 8 14 43 9 43 10 10 21 6 87 16 18 15 57 18 47 22 21 59 9 18 6 18 20 16 62 21 14 25 25 71 25 24 16 32 27 32 18 40
   
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