Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1277 ATGGGTGGTAGTTTTTCCTCTTGTGTCTGTGATGGAGATGCTACCCCCTTGAGGCCAAGGCTTGGGGATTTACCGGAGAGCTGTGTGGCACTGATGTTGATGTATTTGGACCCACCAGATATTTGCAACCTTGCACGACTGAACAGGGCGTTTCGTGATGCTTCGTTAGCTGATTTCATTTGGGAATCGAAGTTACCTTTGAATTATAAGTTCATCGTGGAGAAAGCTTTGAAGGATGCTTGCGTAGAAGAATTGGGGAAGAGGGATACTTACGCTAGACTCTGCAGGCCTAATTTGGTAGAAAACGGGACCAAGGAAATTTGGCTAGATAAGAGGACGGGTGGATTGTGTTTGGCGATTTCTTCCAAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATACTGGAGTCGCATTTCGACGGAAGAGTCAAGATTCCACACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGAAGTTGATTTTCAATTTCCACCTGGGACTTACAGTGTGTTCTTCAGACTCCAGCTTGGCCGATCTTCGAAGAGGTTAGGTCGTCGAGTTTGTAAGACTGATCACATTCATGGCTGGGATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGTCAGCATGCTGTATCCAAAACTCATTTGGATAACCATGGACACTGGGTTCTCTACCATGCAGGAAACTTTGTTTCTAAGAATCCTAATGATCTGATGAAGGTCAAATTTTCATTGGCTCAGATCGATTGTACGCATACCAAAGGTGGTTTGTGTGTAGATTCTGTTTTTATATGCAATAGTGATGTAAAACAAGAGGTGTAG 846 0.4338 MGGSFSSCVCDGDATPLRPRLGDLPESCVALMLMYLDPPDICNLARLNRAFRDASLADFIWESKLPLNYKFIVEKALKDACVEELGKRDTYARLCRPNLVENGTKEIWLDKRTGGLCLAISSKALRITGIDDRRYWSRISTEESRFHTVAYLQQIWWLEVEGEVDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKTDHIHGWDIKPVKFQLTTSDGQHAVSKTHLDNHGHWVLYHAGNFVSKNPNDLMKVKFSLAQIDCTHTKGGLCVDSVFICNSDVKQEV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1277 281 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Vra9g1277 281 SUPERFAMILY F-box domain 18 74 IPR036047 GO:0005515
Vra9g1277 281 Pfam Phloem protein 2 117 272 IPR025886 -
Vra9g1277 281 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Vra9g1277 281 PANTHER F-BOX PROTEIN PP2-A13 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1277 Vra-Chr9 20689782 20692613 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1277 - - gmx:100814033 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1277 9 20689782 20692613 Vra9g1277 9 20689782 20692613 ECH
Vra7g1471 7 32013239 32015988 Vra9g1277 9 20689782 20692613 ECH