Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1471 ATGGGTTTGCGATTTTCGTCTCAGCCGTCGGAATCGGCGCCCAAGTACGGTTTGGGCGAGTTGCCCGAGAGTTGCGTCGCTGAGATCATGACCTACATGAACCCTCCCGAGATTTGCAAGCTTGCTACGCTCAATCGCGCCTTCCGCGGTGCTTCCTCCGCGGATTTCGTCTGGGAGTCTAAGCTGCCGTCCAATTACTCCGTCCTACTCCGCCGCATCTTCCATGATTTCCCCTCTCATTTGGGGAAGAGGGGGATTTACGCCAGGCTTTGCAGACTCAATTCTCTTGATGACGGCACCAAGAAAGTGTGGCTGGATCGGAGCACGGGTAAGCTGTGTTTGTGCGTTTCGGCCAAGGGATTGTCCATAACCGGGATTGATGATAGGAGATACTGGAACCATATCCCCACTGAGGAATCTAGATTCAACAGTGTTGCGTACCTCCAGCAAATCTGGTGGTTTGAAGTGGATGGAGATGTTGAGTTCCCGTTTCCTGCTGGGAGATACAGCATATTCTACAGAATACATCTAGGACGAGCCTCCAAAAGATTTGGCCGGCGAGTATGCAACACAGAGCATGTTCATGGGTGGGATGTAAAGCCTGTTCGTTTCCAGCTATGGACTTCAGATGGCCAGTATGTTACATCCCAGTGTTTTCTGAATGGACCAGGTAAATGGGCCTTTTACCATGCAGGCGATTTTGTTGTCGAGAATGGTAATGTATCAACAAAAGTTAAATTCTCTATGACTCAAATTGACTGTACACATACAAAAGGAGGGCTCTGTTTAGATTCTGTGCTCATATATCCAAGTGAATTCAGAAAGGTTAAAGCATTTTTAAATAGCTCTTAA 852 0.48 MGLRFSSQPSESAPKYGLGELPESCVAEIMTYMNPPEICKLATLNRAFRGASSADFVWESKLPSNYSVLLRRIFHDFPSHLGKRGIYARLCRLNSLDDGTKKVWLDRSTGKLCLCVSAKGLSITGIDDRRYWNHIPTEESRFNSVAYLQQIWWFEVDGDVEFPFPAGRYSIFYRIHLGRASKRFGRRVCNTEHVHGWDVKPVRFQLWTSDGQYVTSQCFLNGPGKWAFYHAGDFVVENGNVSTKVKFSMTQIDCTHTKGGLCLDSVLIYPSEFRKVKAFLNSS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1471 283 PANTHER F-BOX PROTEIN PP2-A12 4 278 - -
Vra7g1471 283 PANTHER F-BOX PROTEIN PP2-A15 4 278 - -
Vra7g1471 283 SUPERFAMILY F-box domain 9 93 IPR036047 GO:0005515
Vra7g1471 283 Pfam Phloem protein 2 112 270 IPR025886 -
Vra7g1471 283 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1471 Vra-Chr7 32013239 32015988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1471 - - gmx:100777716 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1471 7 32013239 32015988 Vra7g1471 7 32013239 32015988 ECH
Vra7g1471 7 32013239 32015988 Vra9g1277 9 20689782 20692613 ECH