Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1101 ATGGGGCATTCGGGTGAAGATGGTTTAATTTGTGATCTTGGAAATGGAATGAGGATGAGTGGTGATGAAGAGTATTTGGAGAAAAGGGCCAATACATCTTCCATTCAAGATGCTGTCAAAGTTCTCTTGACTGCTTTAGGGGAAGATATCAACAGGGAAGGCATCATAAAGACGCCACTTCGTGTTGCCAAGGCCCTTTCCGAAGGAACTAGAGGTTATGATAAAAGTGTTAAGGAAATTGTGGAAGGTGCATTATTCCCTGAAGGCGGAGTAGAAAAGAACAAAGTTGGAGATGCAGGTGGAGTAGGTGGACTTGTGATTGTGAGAGACCTTGATTTTTACTCTTACTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGCTATGTNCCTTCTGCTCAAAGAGTTCTGGGTTTAAGCAAACTCTCTCGTGTCACCAATGTCTTTGCAAAACGTCTCCAAGAGCCTCAGCGTCTTGCAAATCAGATCTGTTCCGCTTTGCATGAAGGAATACAACCCACAGGCGTTGCTGTTGTGCTTCAATGCAAACACATTCCCTTTCCAGACATGGAATCAAATTCTCTTCACTCAAACCACAAAGGGGTCCTGGGAATACTGGTTTCTTCAGGCTCTGGTGTTTTTCAAAACAAAGATTCAAACTTNTGGGCTGACTTTTTTGGCCTCCTTAACTTTAGGGGCATTGACAAGGACAAAATTATTGATAAAGGCTCATTGGGCAATTGTTGGTGTCCTTCTTTGTCTTCTAAAGTTTCACCAAAGAATGAAGAAATGAACCCTGCTATGGTCACTGCAGTAGCTTCAATTCTCAAGNCTTTAGGTGAGGATCCAACTAGGAAGGAATTACAAGGGACTCCTGCTAGATATACCAAGTGGCTGATGAACTTCCAGTGTAATACCATTGAGAAGGCGCTGAAGGGTTCGCTTGGAAGTTGGACAAATGGTGCTTTGAACACTAATGGGGTGCTAGGTTTTGATGAAAAGATACACTCAGAGCTGAACTTGCCTTTCTTGTCTCAGTGTGAGCATCATTTGCTTCCATTTCATGGTGTTGTTCACATAGGATACTACATTTCCAAAGGGTTTCATCCCATTGAGAAAAGGCTCTTGCAGTCAATAGTGCACTTTTATGGTATTAAGCTGCAGGTTCAAGAAAGGGTGACCAAGCAGATCGCAGAAACGATTTCTGCACTGATAGGTGAAAATGTGATAGTAGTGGTGGAAGCAAGTCACACCTGTATGATTTCTCGGGGAATTGAGAAGTTCGGTAGTAATACTGCTACCATTGCTGCATTGGGACGCTTTTCAACTGACCTTGCTGCAAGGGCTGTGTTCCTCAACAGTATTCCGAAGGCCATATATCTTTCAGAACATTGA 1404 0.4295 MGHSGEDGLICDLGNGMRMSGDEEYLEKRANTSSIQDAVKVLLTALGEDINREGIIKTPLRVAKALSEGTRGYDKSVKEIVEGALFPEGGVEKNKVGDAGGVGGLVIVRDLDFYSYCESCMLPFYFKCHVGYVPSAQRVLGLSKLSRVTNVFAKRLQEPQRLANQICSALHEGIQPTGVAVVLQCKHIPFPDMESNSLHSNHKGVLGILVSSGSGVFQNKDSNXWADFFGLLNFRGIDKDKIIDKGSLGNCWCPSLSSKVSPKNEEMNPAMVTAVASILKXLGEDPTRKELQGTPARYTKWLMNFQCNTIEKALKGSLGSWTNGALNTNGVLGFDEKIHSELNLPFLSQCEHHLLPFHGVVHIGYYISKGFHPIEKRLLQSIVHFYGIKLQVQERVTKQIAETISALIGENVIVVVEASHTCMISRGIEKFGSNTATIAALGRFSTDLAARAVFLNSIPKAIYLSEH* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1101 467 Gene3D - 100 234 IPR043133 -
Vra9g1101 467 Gene3D - 259 309 IPR043134 -
Vra9g1101 467 Gene3D - 23 80 IPR043134 -
Vra9g1101 467 PANTHER GTP CYCLOHYDROLASE I 2 462 IPR001474 GO:0003934|GO:0046654
Vra9g1101 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 24 233 - -
Vra9g1101 467 Pfam GTP cyclohydrolase I 35 188 IPR020602 -
Vra9g1101 467 Pfam GTP cyclohydrolase I 273 458 IPR020602 -
Vra9g1101 467 Gene3D - 335 461 IPR043133 -
Vra9g1101 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 251 459 - -
Vra9g1101 467 PANTHER GTP CYCLOHYDROLASE I 1 2 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1101 Vra-Chr9 14103745 14105525 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1101 K01495 - gmx:100792313 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0132 4 3632961 3637056 Vra9g1101 9 14103745 14105525 PCT