Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0132 ATGGGGTGTTTGGATGATGGGCGTTTCGCTGTTGAGATTGAAAATGGAGTGAGCAATGGTTGTGGTGAAGTGGGGTTAGGGAATGATGGTGGTGCCATTGAGGAGGCTGTGAAGGTTTTGTTGGAGGGTCTTGGGGAAGATGTGAACAGGGAAGGACTGAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTAGTGAAGGAACCAGAGGGTACAAGCAAAAGGTGAAGGACATTGTTCAAGGTGCTTTGTTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGTGGAGCAGGTGGACTTGTGATTGTTAGAGATCTTGACCTGTTTTCTTATTGTGAGTCTTGCTTACTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTGAGCAAGCTCTCACGTGTTGCTGATGTATTTGCAAAACGGCTTCAAGAGCCTCAACGTCTGGCAGATGAGATGTGTTCTGCTTTGCATCAGGGAATAAAGCCTGCAGGTGTCGCTATCGTACTTCAGTGTACACACATACACTTTCCAGACATAGAATCAGTCTTTCTGGACACAAACCACGAAGGATGGGTTAAGATACTTGTTTCCTCAGGTTCTGGGGATTTTGAGAACAAAAGTGCAGATGTATGGAACGATTTCTTTAGTCTTCTTAAGTTCAGAGGTTTCAGCATGGATAAAATTCACTTCAGAGGATTATCTGACCCATGCTGGTGTCCTTCTCAGTCTTCTCTCTCAGCCAAAGTTTCCTCCAAAATTGGACCAGTCAATCCTACAATGATCTCTGCTGTAGCTTCGATCATTGAATCTTTGGGAGAAGATCCTTTAAGGAACGAGCTAATAGGGACCCCAAGTAGATTTGTGAAATGGTTGATGAACTTTAAAAACAGTAAGTTTGATGTGAAGTTGAATGGTTTTCTTCGTGGTGGGATGGATGCTTTGAATGTAAATGAGGGGAATAACTTAAACAAAAAAATAACCTCTGAGCTGAATATACCCTTTTGGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGTTCACATAGGATACCTCATATCTGACGGATTCAATCCTATTGGAAAATCACTTCTACAATCAATAGTACATTTTTATGGTTTCAAGCTTCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTTCCCCACTGTTAGGTGGAGATGTGATTGTAGTTGTAGAGGCAAGTCACACATGTATGATCTCTAGGGGAATTGAGAAGTATGGAAGTAGTACGGCTACGATCGCCGTGTTAGGACGTTTTTCAACTGACACCTCTGCCAGAGCCTCATTCTTGCAGAGTATTCCAAGTCCTACATCAACTGGGGAGCAATGA 1401 0.4333 MGCLDDGRFAVEIENGVSNGCGEVGLGNDGGAIEEAVKVLLEGLGEDVNREGLRKTPLRVAKALSEGTRGYKQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEMCSALHQGIKPAGVAIVLQCTHIHFPDIESVFLDTNHEGWVKILVSSGSGDFENKSADVWNDFFSLLKFRGFSMDKIHFRGLSDPCWCPSQSSLSAKVSSKIGPVNPTMISAVASIIESLGEDPLRNELIGTPSRFVKWLMNFKNSKFDVKLNGFLRGGMDALNVNEGNNLNKKITSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKYGSSTATIAVLGRFSTDTSARASFLQSIPSPTSTGEQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0132 466 Pfam GTP cyclohydrolase I 273 457 IPR020602 -
Vra4g0132 466 Pfam GTP cyclohydrolase I 33 185 IPR020602 -
Vra4g0132 466 Gene3D - 96 232 IPR043133 -
Vra4g0132 466 Gene3D - 267 309 IPR043134 -
Vra4g0132 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 23 229 - -
Vra4g0132 466 PANTHER GTP CYCLOHYDROLASE I 1 462 IPR001474 GO:0003934|GO:0046654
Vra4g0132 466 PANTHER GTP CYCLOHYDROLASE I 1 1 462 - -
Vra4g0132 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 266 458 - -
Vra4g0132 466 Gene3D - 327 459 IPR043133 -
Vra4g0132 466 Gene3D - 29 79 IPR043134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0132 Vra-Chr4 3632961 3637056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0132 K01495 - gmx:100783814 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0132 4 3632961 3637056 Vra9g1101 9 14103745 14105525 PCT