Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0776 ATGGAGAAAAGGGTTAACATAGCAGTAGTTCCAGGTCCTGGCTTCAGCCACTTGGTTCCAATTCTTCAATTTTCAAAGAGGCTTCTTCAGCTTCATCCAAACTTTCATGTCACATGTCTAATTCCCTCATTTGGGTCTCCTTCAAGTGCCTCAAAATCCGTTCTTGAAACTCTTCCACCAAACATCAAATCCATTCTTCTTGAACCAGTCAAACCAGAGGACCTACCAGAAGGGGTTGCCATAGAAACTCAAATTCAGTTCACGGTGACTCTCTCACTTCCTTCCATACATCAGGCCTTGAAGAGCATAACTTCAAAGACCCCCTTTGTGGCCTTGGTGGCTGATTCTTTTGCCTTTGAAGCATTAGATTTTGCTGAGGAGTTCAACCTGTTGTCCTATATTTACTTCCCTTCAGCTGCAACAACACTGTCTTGGTACTTGTATGCGCTGAAATTGGACAAGGAGACTTCTTGTGAGTACAGAGACTTGCCTGAGCCTGTTAAGATACCAGGCTGTGTACCAATTCATGGCAGGGATCTCAATAACCAAGCTCAAGACAGATCAAGTCAGGTTTACAAACTCTTCCTTCAGCGCGCTCAGCGGTTCTGTTTTGTTGATGGGATTTTCATCAATAGCTTCTTTGAAATGGAAAAAGGTCCTATAAGAGCATTGAAAGAGGAGGGAAGAGGGTACCCTGAGGTGTTTCCTGTTGGACCAATTGTTCAAACTGGTGATGATGCTAAAGGGTTGGAGTGTCTCACATGGTTGGACAAACAAGAAGATGGTTCGGTTTTGTATGTTTCTTTTGGGAGTGGTGGAACACTCACACAAGAACAAGTAAATGAGCTGGCTTATGGTTTGGAATTGAGTAATCACAAGTTCTTGTGGGTTGTGAGAGAACCGAGTAGTTTAGCCTTTGATGCATATCTCAGAGCACAAAGAAGTGTTGATCCTTTGCATTTTTTACCAGATGGGTTTTTGGAGAGAACCAAAGAGCAAGGTATGGTTGTTCCTTCATGGGCACCCCAGATTCAAGTCCTTGCTCACAGTTCAATTGGAGGGTTTTTGACTCACTGTGGTTGGAATTCAATCCTTGAGAGTGTGGTGCATGGTGTGCCACTCATCACATGGCCACTGTTTGCAGAGCAGAGAATGAATGCAGTTGTGTTGAGTGAGGGTCTGAAAGTTGGAGTGAGGCCAAGAGTGAGTGAAAATGGGTTGGTGGAAAGGGAGGAAATTGTGAAGGTGATAAAGTGTTTGATGGAAGGGGAAGAAGGTGGGAAAATGCACAAAAGAATGGANGAATTAAAAGAAGCTGCTAATAATGCACTAAAAGAAGATGGATCCTCTACAAAGACCCTTTCTGATTTGGTACAAAAATGGGAAAGTTTGGTTTAG 1398 0.4328 MEKRVNIAVVPGPGFSHLVPILQFSKRLLQLHPNFHVTCLIPSFGSPSSASKSVLETLPPNIKSILLEPVKPEDLPEGVAIETQIQFTVTLSLPSIHQALKSITSKTPFVALVADSFAFEALDFAEEFNLLSYIYFPSAATTLSWYLYALKLDKETSCEYRDLPEPVKIPGCVPIHGRDLNNQAQDRSSQVYKLFLQRAQRFCFVDGIFINSFFEMEKGPIRALKEEGRGYPEVFPVGPIVQTGDDAKGLECLTWLDKQEDGSVLYVSFGSGGTLTQEQVNELAYGLELSNHKFLWVVREPSSLAFDAYLRAQRSVDPLHFLPDGFLERTKEQGMVVPSWAPQIQVLAHSSIGGFLTHCGWNSILESVVHGVPLITWPLFAEQRMNAVVLSEGLKVGVRPRVSENGLVEREEIVKVIKCLMEGEEGGKMHKRMXELKEAANNALKEDGSSTKTLSDLVQKWESLV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0776 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 461 - -
Vra9g0776 465 Gene3D Glycogen Phosphorylase B; 245 445 - -
Vra9g0776 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 247 390 IPR002213 GO:0008194
Vra9g0776 465 CDD GT1_Gtf-like 6 461 IPR002213 GO:0008194
Vra9g0776 465 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Vra9g0776 465 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Vra9g0776 465 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Vra9g0776 465 Gene3D Glycogen Phosphorylase B; 7 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0776 Vra-Chr9 8951532 8953351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0776 6 463 Glycosyltransferase AT1G01420 48.596 8.58e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0776 K08237 - gmx:100778639 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0776 9 8951532 8953351 Vra4g0550 4 10494444 10496123 PCT