Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0722 ATGGCCACTGCCAATCCCTTTGATTTATTGGGCGACGATGCGGAGGACCCGTCGCAGTTGATCGCGGCCGAGCAGTTGAAGGCCGCCGCGGCCCCGAAGAAAGAGCAGGGCAAGGCTGGACCCCGCGCTGGTGCGGTGGCTCAGCAGAGCAAACCGGCTCAGTTGCCTTCCAAGCCAGTTCCTCCCACTCAGGCTGTGAGGGAGGCAAAAAATGAAACCTCTTATGGTGGCCGTGGAGGTGGCCGAGGTGGTGGACGAGGATATGGACGTGGGCGGGGTGGTGGCAGTGGCTTTGGTCGTGATTTTTCCAATGACGAGAACTCATCTGCCCCTGCTAACCAAGGATCTTTTGAAGGGGAGGCTGGGAATCCCTCAGAAAGGCGTGGTTATGGTGCACCACGCGGGCCTTATCGTGGCAGTGGTCGTGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGCTGGTGATGATGGACGCCCAAGAAGAGCCTTTGAACGCCACAGTGGGACTGGACGAGGAAATGAATTCAAACGGGATGGGGCTGGACGTGGAAACTGGGGTACCCAATCTGATGAAATTGCTCAGGTCACTGAGGAAGTGCCGGATGAAACGGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGTGAGGAAGATGCTGCAGATGGAAACAAGGACAGTCCTGCTAATGAAAATGAAGAGAAGGAACCAGAGGACAAGGAGATGACCCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCGCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAGCCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCTGAAAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCAATGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACAAGTGGTCGTGGAAGAGGACGTGGTCGTGGTGCTCGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTTGCAGCTCCATCAATTGAGGATCCTGGCCAATTCCCAACTTTGGGTGGCAAGTGA 1107 0.5257 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAPKKEQGKAGPRAGAVAQQSKPAQLPSKPVPPTQAVREAKNETSYGGRGGGRGGGRGYGRGRGGGSGFGRDFSNDENSSAPANQGSFEGEAGNPSERRGYGAPRGPYRGSGRGRRGGFSNGEAGDDGRPRRAFERHSGTGRGNEFKRDGAGRGNWGTQSDEIAQVTEEVPDETEKNFGDEKPVGEEDAADGNKDSPANENEEKEPEDKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSEKDKRKDALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGARGGYSGNAGSNVAAPSIEDPGQFPTLGGK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0722 368 MobiDBLite consensus disorder prediction 101 120 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 290 309 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 260 283 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 149 178 - -
Vra9g0722 368 Pfam Hyaluronan / mRNA binding family 159 266 IPR006861 -
Vra9g0722 368 Gene3D - 157 270 - -
Vra9g0722 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
Vra9g0722 368 SMART HABP4_PAI_RBP1_2 159 267 IPR006861 -
Vra9g0722 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 318 368 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 25 242 - -
Vra9g0722 368 Pfam Stm1 1 80 IPR019084 -
Vra9g0722 368 Coils Coil 242 265 - -
Vra9g0722 368 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0722 Vra-Chr9 8242117 8245977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0722 K13199 - gmx:100791259 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0722 9 8242117 8245977 Vra9g0722 9 8242117 8245977 ECH
Vra9g0722 9 8242117 8245977 Vra4g0952 4 16547532 16552306 PCT