Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0952 ATGGCAACCATGAACCCATTTGATTTGTTGGGTGACGACGCAGAGGACCCTTCACAGCTCATAGCGGCCGAGCAACTCAAGGCGGCGGCAGCGGCTGCGGCGGCCGCCGCGGCTCCCAAGAAGGCGCCTGTTCAGCAGAACAAGCCGGCTCAGCTGCCCACCAAGCCTCCTCCTCCTGGTCAAGCCGTTAGGGAGTCCAGAAATGAGCCTGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGTGGACGTGGGTTTGGACGTGGTCGTGGGTTTGGTAGGGACTCTTCCAATGATGAGAATTCGTTTCCTGGCACTGGAACTCCTTACAATTCAGGTTCTTTTGAAGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGTGGGTACGGTGGACCACGAGGTCCTTATCGTGGTGGGCGCCGTGGAGGTTTTAGCAATGGTGAAAGTGGTGAAGGTGAAGAAGGACGCCCTCGAAGAGCATTTGATCGTCGCAGTGGGACGGGCCGAGGAAATGAATTTAAACGTGAAGGTGCTGGACGTGGTAATTGGGGAACGCAAAGTGATGATATTACCCAGGAAACTGAGGAAGTTGTGAATGAAACTGAAAAGAATTTGGGAGATGAGAAGCCTGCAGTTGAAGAAGTAGCTGATGGAAACAAGGATAATCCTGCCAATGACACTGAAGAGAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATACGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGGGAGAAAGGTGGACACTAAAGAATTTGCATCCATGCAACCCTTGTCAAGCAAAAAGGACAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAGGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCTGTTAGCATCACCGAATTCCTGAAGCCTGCTGAAGGGGAAACTTACTACAACCCAGGTGGACGTGGTAGAGGCCGTGGCCGTGGCTCTCGTGGTGGTTTTCGTGGAGGTGTTACCAACAGTGCACCTGCCCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGGCAAGTGA 1095 0.5151 MATMNPFDLLGDDAEDPSQLIAAEQLKAAAAAAAAAAAPKKAPVQQNKPAQLPTKPPPPGQAVRESRNEPVRGGRGGGRGGGRGFGRGRGFGRDSSNDENSFPGTGTPYNSGSFEEGDAGKSSERRGYGGPRGPYRGGRRGGFSNGESGEGEEGRPRRAFDRRSGTGRGNEFKREGAGRGNWGTQSDDITQETEEVVNETEKNLGDEKPAVEEVADGNKDNPANDTEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDTKEFASMQPLSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGETYYNPGGRGRGRGRGSRGGFRGGVTNSAPAPSIEDPGHFPTLGGK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0952 364 Coils Coil 238 258 - -
Vra4g0952 364 MobiDBLite consensus disorder prediction 195 237 - -
Vra4g0952 364 MobiDBLite consensus disorder prediction 30 237 - -
Vra4g0952 364 MobiDBLite consensus disorder prediction 150 175 - -
Vra4g0952 364 Pfam Hyaluronan / mRNA binding family 156 262 IPR006861 -
Vra4g0952 364 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 364 IPR039764 GO:0003723
Vra4g0952 364 Pfam Stm1 1 77 IPR019084 -
Vra4g0952 364 MobiDBLite consensus disorder prediction 287 308 - -
Vra4g0952 364 Gene3D - 154 266 - -
Vra4g0952 364 MobiDBLite consensus disorder prediction 95 112 - -
Vra4g0952 364 MobiDBLite consensus disorder prediction 287 364 - -
Vra4g0952 364 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 364 - -
Vra4g0952 364 SMART HABP4_PAI_RBP1_2 156 263 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0952 Vra-Chr4 16547532 16552306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0952 K13199 - gmx:100814825 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0952 4 16547532 16552306 Vra4g0952 4 16547532 16552306 ECH
Vra9g0722 9 8242117 8245977 Vra4g0952 4 16547532 16552306 PCT