Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0719 ATGAAGCTTGCTATGAGAGTAGCTTCAATCCAACCACGTACATCATCCTCTATTTCTCAAAACAACCCTACTTGTCCATTTTTTGAATCCAACATAAGCTCACAATTCAGCAAGTCTTTGCCATCTCCATCAACCAAATGCAACTTTCCCAAACTTAGACAGAAATGGAAGCAATACCAAGGAATTGACCATTGGGAAGGTGGTCTTGTCGTCACAGGAGAAGAAGATGCTCCCATGGTGCAAAAAGGGTTTTTCAGTCTTTACACATCCAAAACATCTACACGTGCAAGTTTGCAAGAGATGATAAGAAAAGAGATTGGAAGAGTGATTCAAAAATACACTAATGAACCTCTTAGTTTAACCCTAACAGGTCATAGTCTTGGAGCTGCACTTGCGATTTTGAGTGCATATGATATAACCACCACTTTCCAGAATGCACCTATGGTTACTGTTATTTCATTTGGTGGACCTCGTGTCGGAAATGACAGTTTTAGAAAGCAATTGGAACAAAAAGGGATTAAGATACTAAGAATAGTAAACTCCGATGATGTTGTTACAAAAGTTCCAGGCTTTATTTTGAACTTAGATGAATTCGTAAATAATGAGGATGTTGGTGTGGGAATTTGGTCAAGATGGTTATACAAATACATAGAAAACATGCAATTGGAATATGTTGACATTGGACAAGAGTTGAGACTAAGTAGTAGGGAGTTTCCATGTCTCAATAGGAGAGATGTTGTTATGTGTCATGATCTCAAAACATACCTTCATTTGGTCAAAAACTTTGTAAGCTCCTCTTGTGCTTGTAAACACAAAAAGATTCACTCCATTCAGTCATGA 840 0.3774 MKLAMRVASIQPRTSSSISQNNPTCPFFESNISSQFSKSLPSPSTKCNFPKLRQKWKQYQGIDHWEGGLVVTGEEDAPMVQKGFFSLYTSKTSTRASLQEMIRKEIGRVIQKYTNEPLSLTLTGHSLGAALAILSAYDITTTFQNAPMVTVISFGGPRVGNDSFRKQLEQKGIKILRIVNSDDVVTKVPGFILNLDEFVNNEDVGVGIWSRWLYKYIENMQLEYVDIGQELRLSSREFPCLNRRDVVMCHDLKTYLHLVKNFVSSSCACKHKKIHSIQS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0719 279 Gene3D alpha/beta hydrolase 56 276 IPR029058 -
Vra9g0719 279 PANTHER TRIGLYCERIDE LIPASE-RELATED 74 272 - -
Vra9g0719 279 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 74 272 - -
Vra9g0719 279 Pfam Lipase (class 3) 67 191 IPR002921 GO:0006629
Vra9g0719 279 CDD Lipase_3 73 197 - -
Vra9g0719 279 SUPERFAMILY alpha/beta-Hydrolases 80 235 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0719 Vra-Chr9 8186647 8187891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0719 68 267 Acyl Lipid Metabolism Gene Families AT2G44810 57.000 2.90e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0719 K16818 - gmx:106798329 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0719 9 8186647 8187891 Vra4g0956 4 16632862 16634100 PCT