Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0715 ATGGGTTGCACAGCATCGAAGCTGGACAACGAGGAAACCGTGATGCGCTGCAAGGAGCGGCATCGTTTAATGAAAGATGCTGTCTATGCACGCCACCACCTAGCGGCAGCGCACTCCGAATACTGCCACTGCCTCCGCCTCACCGGTTCTGCACTCTACACTTTCGCCGCTGCCGAACCCCTCACAGTCGCCGAAGACACCCCTGCCGTCCTCCTTCACAAAACCACCAATGATTCCCAATCGTCACCACGTCCTCCTCCCTCCGCCACCGCTTCAGCTAGCCCTAAACTCCCTCGCATAGTAACCTCCGGGGTCACGCGCCGCCGTCAACAGCCGTCGAGACTCCCTCACGTTCTCTCCGAACCGAGCCTCTGTTCGTCGCCTCGAAGCGAGTTTTCGAACTTCTCAGCCGCTCAACAACAACCCGAACCCGAACCCTCACCTACTTCACATCCGCCGCAACCTCCTCTTCCCGCCGTCACTCGCCGCCGCAAACCACCGCCGAAGCTCCCTCACATACTCTCCGAATCCAGCCTCTTCTCCTCGCCGCGAAGCGAATACTCGAATTTCTTCGCCACCGCGCACCAAGCTCAATCCACGCCTACTTCACAAACCTCTTCCGTTTGGAACTGGGAGAATTTCTATCCTCCTCCTTCTCCTCCAGGCTCCGATTACTTCCGCCAACGCCAAAACCACAAACAGCAAACAACGACAAATTTCGAAACGTCGGAATCGGAATCTGAATCGATGTACAATCCGTTCCGTTCAAACTCTCAACGCAATCGCAAAATTGATAACAGTACAAACGTCGATTCACAAGAACAAAAGGCAGAACCAGAGATTTCCGAATCAGAAACGGAATCGGAAGAGAAATACTTACATGAACCGGTTCAGACGGAGCGCGAGGAGGTTCGGTGCAGCGAGTGGGAGGACCGTTACAGTTCCTCGAGTTCGTCGGAGCAGGAGGAAGGAGGCGTCGGAGTGACCTCACCGTCTAAGGCTCAGTATGTCGCCGGAGGCTATGCTCCGGGAGCGAAGAATGAGAAGGTCAGCGATAACGTGGCGGAGGCGAAGGTAGCGGTGAGACATAGGGATTTGAAAGAGATAGTGGAAGCGGTTAGGGAGAATTTTGAGAAAGCTGCAGTGGCCGGAGATCAGTTATCGGAGATGCTCGAGGTTAGCAGAGCGCACCTTGATCAGAGTTTTAAGCAATTGAGGAAAACACTTTACCATTCAAATAGTGTACTCAGCAAGCTAAGCTCGAGTTGGACCTCTAAACCGCCGTTGGTGGTTAAGTACCGGCTCGACGCCGGTTCGTTGGACGGACCGGGCGGTTCAAAGAGCCTGTGTTCCACTTTGGAACGCCTTTTGGCTTGGGAGAAGAAGCTGTATCAGGAAGTGAAGGCAAGAGAATGTGTGAAGATTGAGCATGAAAAGAAACTGTCAGCTCTGCAGAGTCTAGAATGCAAAGGTGGTGATGAAGCAAAGCTAGATAAGACCAAGGCTTCCATAACAAGGTTGCAGTCATTAATTGTTGTTACATCTCAAGCTGTATCCACCACCTCAGCTGCCATTAATGGCCTTAGGGATGCTGATCTTGTTCCTCAGCTTGTTGATCTCTGCCGTGGAATCATGTATATGTGGAAGTCAATGCATCAGTACCATGAAATCCAAAGCAACATTGTGCAGCAAGTCCGTGGGCTTGTGAACCAATCATCCAAAGGTCACTCAACATCTAAATCACACAAGCAGGCAACAAGGGATCTTGAATCAGCTGTGTCAGCTTGGCATTCCAGTTTCTGCCGCCTCATAAAGTTTCAACGTGAGTTCATCCTTTCTCTGCATGGCTGGCTCAAGTTGAACCTTGTTCCAGTAAAAAATGACAGCAGCAGCAGCAGCAACAATAACAGTGAATCATCTCATGTGTTTTCTTTCTGTGATGAATGGAAACTTGCCCTTGATCGTGTTCCGGACACAGTTGCTTCAGAAGCAATCAAGAGCTTCATCAACGTTGTGCATGTGATATCAGTGAAGCAATCTGAGGAGCTGAAGATTCAGAAGAGAAGTGAGAGTGCCTCCAGGGAACTTGAGAAGAAATCTTCATCTCTGAGAAGCATAGAAAGGAAGTTTTACAACTCATATTCTATGGTAGGCATTACCCCTCCTGAGTTAGGTCCTGCTAATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAGAAACTGAAACTAGCATCTTACCAAAGACGTGTTGAAGATGAAATGGTGAGGCATTCAAAAGCTGTTGAGGTGACCAGAGCTATGACACTCAACAATCTTCAGACTGGTTTACCTGGAGTGTTCCAGGCAATGGCAAGTTTTTCTTCATTATTCACTGAGGCTCTTGAGTCAGTATGTAGCCATTCACGTGCCATGAAGTAG 2424 0.4996 MGCTASKLDNEETVMRCKERHRLMKDAVYARHHLAAAHSEYCHCLRLTGSALYTFAAAEPLTVAEDTPAVLLHKTTNDSQSSPRPPPSATASASPKLPRIVTSGVTRRRQQPSRLPHVLSEPSLCSSPRSEFSNFSAAQQQPEPEPSPTSHPPQPPLPAVTRRRKPPPKLPHILSESSLFSSPRSEYSNFFATAHQAQSTPTSQTSSVWNWENFYPPPSPPGSDYFRQRQNHKQQTTTNFETSESESESMYNPFRSNSQRNRKIDNSTNVDSQEQKAEPEISESETESEEKYLHEPVQTEREEVRCSEWEDRYSSSSSSEQEEGGVGVTSPSKAQYVAGGYAPGAKNEKVSDNVAEAKVAVRHRDLKEIVEAVRENFEKAAVAGDQLSEMLEVSRAHLDQSFKQLRKTLYHSNSVLSKLSSSWTSKPPLVVKYRLDAGSLDGPGGSKSLCSTLERLLAWEKKLYQEVKARECVKIEHEKKLSALQSLECKGGDEAKLDKTKASITRLQSLIVVTSQAVSTTSAAINGLRDADLVPQLVDLCRGIMYMWKSMHQYHEIQSNIVQQVRGLVNQSSKGHSTSKSHKQATRDLESAVSAWHSSFCRLIKFQREFILSLHGWLKLNLVPVKNDSSSSSNNNSESSHVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIQKRSESASRELEKKSSSLRSIERKFYNSYSMVGITPPELGPANGQGLDARDPLAEKKLKLASYQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQAMASFSSLFTEALESVCSHSRAMK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0715 807 MobiDBLite consensus disorder prediction 145 164 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 311 328 - -
Vra9g0715 807 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 807 - -
Vra9g0715 807 Coils Coil 689 709 - -
Vra9g0715 807 Pfam Protein of unknown function (DUF632) 366 673 IPR006867 -
Vra9g0715 807 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vra9g0715 807 MobiDBLite consensus disorder prediction 175 213 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 75 332 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 123 144 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 276 310 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 224 275 - -
Vra9g0715 807 PANTHER UNCHARACTERIZED 1 807 - -
Vra9g0715 807 MobiDBLite consensus disorder prediction 95 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0715 Vra-Chr9 8112296 8118396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0715 448 672 Acyl Lipid Metabolism Gene Families AT2G27090 32.609 2.19e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0715 - - gmx:100792843 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0715 9 8112296 8118396 Vra9g0715 9 8112296 8118396 ECH
Vra9g0715 9 8112296 8118396 Vra4g0959 4 16695809 16701102 PCT