Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0959 ATGGGTTGCACGGCGTCCAAGCTAGAAAACGAGGACACCGTGCGTCGTTGCAAGGACCGCCGCCGTCTAATGAAGGATGCCGTCTACGCGCGCCACCAACTCGCTGCCGCCCACTCCGACTACTGCCGTTCCCTCCGCCTAACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGCGAACCCCTCTCCGTCTCTGACCACACCCCTGCCGTCTTCCTCAACAACTCCCAACAACCACCCCCTCCCATCCACCACACTCGCCCACCCTCACCACCTCGCCACCACCCCCACCACCCTCACCACTCTCCACCACCCTTCAACCCTTCTCCGCCGCCGAAACTCGCCCCCATCCAACACCGCCGCCGCAAGCCGCCGCCGCCGAAGCTACCCCATATTCTTTCCGACTCGAGCCCCTCCTCCACGCCACGAAGCCAAGCGTCGAATTTTCCTTCGAACTTTTTCCCCACTGCGCATTCAACATACTCATCCACCCCTTCCCAAACCTCCTCTGTTTGGAACTGGGAAAATTTCTACCCCCCTCCACCTCCTCCCGCTTCCGATTACTTCCCTGAAGAACACCAACACCAACACCAACAAAAACTCTCGCAGGCTCAGACTCAAACACAAACGCAAACACCTTCCCTTCACTCTCACAAAACACAAACAGCCTCTCATTACTCCCACAAAACCCAACCCACCAATCCTCAAATTCATGACTCCGACTCCGAGAGATCTGAATACGATTACTTCGACGGAAAACACGAGACTCAAAAAGCTTACTCCCACTCCCGCTCTCCCTCTCACATTCACTCTGATTCTCACTCTCATCACCATCTTCCTGAAGAGTATACCGAGACTGAGAGGGAAGAGGTTCAGTGCAGTGAGTGGGGGGATCATTACAGCACCACGAGTTCATCCGATGACGATGATGATGGGGTGGAGGAGGATGTGGCGTCGAGGTCCGAGATCGGGACCCGGTCGAATTTCGGGTCGTCCATGCGGGCCGAGTCCGTTGCGGCTGGCGGCGGCGCTAAGGGGTTCGACGCCGCGTCCTCCGTCGCGGAGATGAAGATGGTGGTGAGGCACAGGGACTTGAGGGAGATCGTGGAAGCTATTAAAGAGAATTTTGATAATGCTGCTTCCGCCGGAGATCAGGTTTCGGAGATGCTCGAGATCAGTAAGGCTCAGCTCGATCGCAGCTTCAAACAATTGAGGAAGACTGTGTATCACTCGAGCAGCATATTGAGCAATCTGAGCTCAAGTTGGACCTCGAAACCGCCACTGGCGGTTAAGTACCGGCTGGACACCGGTTCGCTGGATGAACCGGGCGGTTCAAAGAGTCTTTGCTCCACCATAGAACGGCTTTTGGCATGGGAGAAAAAGCTGTACGAGGAGGTTAAGGCTAGAGAAGGTGTTAAGATCGAACATGAAAAGAAATTGTCAGCTCTGCAGACTCAGGAATACAAGGGAGAGGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCACTCATAGTTGTCACTTCTCAGGCTGTGTCTACCACCTCAACTGCCATTGTTGGCCTTAGGGACTCTGCTCTGGTCCCTCAGCTTGTTGCTCTCATTCATGGATTTATGTACATGTGGAAAGCAATGCATAATTACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTTGTGAACAGATCTTCAAGAGGTGACTCCACTTCTGAACTGCACAGGCAGGCTACACGGGACCTGGAAGCAGCCGTGTCAGCCTGGCACTCAAGTTTTTGTCGCCTGATAAAATTTCAGCGGGAGTTCATCCATTCCTTGCATGGCTGGTTCAAGCTCAGTCTTCTTCCAGTGGACAATGATAACATCAACAACAGCAGGGACAACTCTGATACATACCACTTTTTTGATGAATGGAAACTGGCACTTGACCGTGTTCCAGACACGGTTGCATCTGAAGCCATAAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAACTGAAGAGCTGAAGATGAAGAAAAGAACCGAGACAGCATCAAAGGAACTTGAGAAAAAGGCTTCCTCTGTGAGAAACCTAGAGAGGAAGTTCTACAGTTCATATTCTATGGTAGGAATTAGCCTTCCTGATACAGCAGCTGACAATGGACAGGGTCTGGATGCTCGCGATCCACTGGCGGAGAAAAAACTGGAACTGGCAACCTGCCAAAGGCGCGTTGAAGATGAAATGCTGAGGCATTCAAAAGCTGTGGAGGTAACAAGAGCCATGACCCTGAACAATTTGCAGACAGGGTTGCCTGGTGTGTTTCAGGCATTGACCAGTTTCTCTTCCTTGTTCACGGAGGCTCTTGAATCAGTGTGTACTCGTTCTTATGCCATCAAGTAG 2409 0.5201 MGCTASKLENEDTVRRCKDRRRLMKDAVYARHQLAAAHSDYCRSLRLTGSALSTFAAGEPLSVSDHTPAVFLNNSQQPPPPIHHTRPPSPPRHHPHHPHHSPPPFNPSPPPKLAPIQHRRRKPPPPKLPHILSDSSPSSTPRSQASNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEHQHQHQQKLSQAQTQTQTQTPSLHSHKTQTASHYSHKTQPTNPQIHDSDSERSEYDYFDGKHETQKAYSHSRSPSHIHSDSHSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDGVEEDVASRSEIGTRSNFGSSMRAESVAAGGGAKGFDAASSVAEMKMVVRHRDLREIVEAIKENFDNAASAGDQVSEMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLDEPGGSKSLCSTIERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIVVTSQAVSTTSTAIVGLRDSALVPQLVALIHGFMYMWKAMHNYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLEAAVSAWHSSFCRLIKFQREFIHSLHGWFKLSLLPVDNDNINNSRDNSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQTEELKMKKRTETASKELEKKASSVRNLERKFYSSYSMVGISLPDTAADNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0959 802 MobiDBLite consensus disorder prediction 198 237 - -
Vra4g0959 802 Pfam Protein of unknown function (DUF632) 364 668 IPR006867 -
Vra4g0959 802 MobiDBLite consensus disorder prediction 238 294 - -
Vra4g0959 802 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vra4g0959 802 PANTHER UNCHARACTERIZED 1 802 - -
Vra4g0959 802 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 802 - -
Vra4g0959 802 MobiDBLite consensus disorder prediction 132 150 - -
Vra4g0959 802 MobiDBLite consensus disorder prediction 69 150 - -
Vra4g0959 802 Coils Coil 684 704 - -
Vra4g0959 802 MobiDBLite consensus disorder prediction 173 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0959 Vra-Chr4 16695809 16701102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0959 1 97 Acyl Lipid Metabolism Gene Families AT2G27090 30.476 1.03e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0959 - - gmx:100815888 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0959 4 16695809 16701102 Vra4g0959 4 16695809 16701102 ECH
Vra9g0715 9 8112296 8118396 Vra4g0959 4 16695809 16701102 PCT