Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0656 ATGGGCAATTGTTTGCATAAGGGTTATCATAGTGATGGTGATTCTGATCATCATGTGGATTTTGTTTCTGGGAATGTGCAACTTATTACTACCAAAGAATCTTGGGACCAACATTTGGAACAAGCAAATAGGGATAGTAAAATTGTTGTTGCAAATTTCAGTGCAACCTGGTGTGGTCCTTGTAAGATGATTGCTCCATATTTCTGCAACTTGTCCGAGAAGCACTCCTCCATCATGTTCTTATTAGTGGATGTGGATGAAATGACTGACTTCAGCACTTCCTTGGACATCAAAGCCACACCCACTTTCTTCTTTCTTAAAAATGGAAAAGAGTTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAGAAGAGGATTGCTGCGATTACTGGTGGAGTTCCTCATTATCGACAGTGA 420 0.4095 MGNCLHKGYHSDGDSDHHVDFVSGNVQLITTKESWDQHLEQANRDSKIVVANFSATWCGPCKMIAPYFCNLSEKHSSIMFLLVDVDEMTDFSTSLDIKATPTFFFLKNGKEFDKLVGANKPELEKRIAAITGGVPHYRQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0656 139 Gene3D Glutaredoxin 1 133 - -
Vra9g0656 139 PRINTS Thioredoxin family signature 49 57 - -
Vra9g0656 139 PRINTS Thioredoxin family signature 57 66 - -
Vra9g0656 139 PRINTS Thioredoxin family signature 96 107 - -
Vra9g0656 139 SUPERFAMILY Thioredoxin-like 21 131 IPR036249 -
Vra9g0656 139 PANTHER THIOREDOXIN H9 6 134 - -
Vra9g0656 139 PANTHER THIOREDOXIN 6 134 - -
Vra9g0656 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Vra9g0656 139 ProSiteProfiles Thioredoxin domain profile. 17 132 IPR013766 -
Vra9g0656 139 Pfam Thioredoxin 29 127 IPR013766 -
Vra9g0656 139 CDD TRX_family 37 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0656 Vra-Chr9 7504096 7507255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0656 K03671 - gmx:100527258 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0621 4 11686225 11689290 Vra9g0656 9 7504096 7507255 PCT