Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0621 ATGGGGAATTGTGTGGCTAATAAGTCTCAAGCTAAGGATAGTGATTCTGAACATGATGTGGAGTTTGCTGCTGGCAATGTCAAACTTATTACCACCAAAGAAGCTTGGGACCAATATTTGGAAGAAGCTAGGAGGGATGGCAAAATTGTGATTGCGAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGGTGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACACATCCATGATGTTCTTGCTAGTTGATGTGGATGAACTAACTGAGTTCAGCACTTCATGGGACATCAAAGCCACACCTACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAACTTGTGGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATTGTTGCCATCAATGATTCACTTCCCGAATGCAAGCAGTGA 423 0.4255 MGNCVANKSQAKDSDSEHDVEFAAGNVKLITTKEAWDQYLEEARRDGKIVIANFSATWCGPCKVIAPYYCELSEKYTSMMFLLVDVDELTEFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELQKKIVAINDSLPECKQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0621 140 PRINTS Thioredoxin family signature 50 58 - -
Vra4g0621 140 PRINTS Thioredoxin family signature 58 67 - -
Vra4g0621 140 PRINTS Thioredoxin family signature 97 108 - -
Vra4g0621 140 SUPERFAMILY Thioredoxin-like 22 129 IPR036249 -
Vra4g0621 140 Gene3D Glutaredoxin 1 139 - -
Vra4g0621 140 PANTHER THIOREDOXIN H9 7 138 - -
Vra4g0621 140 Pfam Thioredoxin 30 128 IPR013766 -
Vra4g0621 140 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
Vra4g0621 140 PANTHER THIOREDOXIN 7 138 - -
Vra4g0621 140 CDD TRX_family 34 128 - -
Vra4g0621 140 ProSiteProfiles Thioredoxin domain profile. 9 133 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0621 Vra-Chr4 11686225 11689290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0621 K03671 - gmx:100813401 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0621 4 11686225 11689290 Vra4g0621 4 11686225 11689290 ECH
Vra4g0621 4 11686225 11689290 Vra9g0656 9 7504096 7507255 PCT