Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0595 ATGAATGTTTGTATCTCAACAGCATCCTTGGTTGTGCTGCTGATTCTGATATCAGCTAAAAGCTTGTGTTGTGAAGCACAACAGTGTCGTCCAAGTGGGAGAATCATAGGGAAGAAACCACCAGCAGGAGAATGCAACCAAGAGAATGATTCAGAGTGTTGTGTGGAAGGGAAGACGTACAGAACATACAAATGTTCTCCAGCAGTGTCAAGCAACACCATGGCACAACTCACTCTCAACAGTTTTGAAAAGGGTGGAGATGGAGGAGGGCCTTCAGCATGTGACAACAAGTACCATTCTGATGATACACCAGTGGTTGCACTTTCCACCGGATGGTTTAACAACATGAGTAGGTGCCTCCACAATGTTACCATCACTGCAAATGGAAAAAGTGTTGTGGCTATGGTCGTTGACGAGTGTGACTCTACCATGGGATGTGATCAAGACCATGATTTTCAACCTCCTTGTCCCAACAACATTGTTGATGCCTCTAAGGCTGTCTGGAAAGCCTTAGGTGTCCCTCACAGTCAGTGGGGTGGATTGCAAATTACATGGGCTGATGCTTAA 567 0.4568 MNVCISTASLVVLLILISAKSLCCEAQQCRPSGRIIGKKPPAGECNQENDSECCVEGKTYRTYKCSPAVSSNTMAQLTLNSFEKGGDGGGPSACDNKYHSDDTPVVALSTGWFNNMSRCLHNVTITANGKSVVAMVVDECDSTMGCDQDHDFQPPCPNNIVDASKAVWKALGVPHSQWGGLQITWADA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0595 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 7 188 IPR039271 -
Vra9g0595 188 PANTHER LIPID TRANSFER PROTEIN 7 188 - -
Vra9g0595 188 Gene3D - 75 187 IPR036908 -
Vra9g0595 188 SUPERFAMILY Barwin-like endoglucanases 67 186 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0595 Vra-Chr9 6728264 6729025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0595 - - gmx:100785431 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0595 9 6728264 6729025 Vra9g0595 9 6728264 6729025 ECH
Vra4g0740 4 13738478 13739684 Vra9g0595 9 6728264 6729025 PCT