Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0740 ATGGATAGAATGAAGAGGTTTTGCTCAAACGCATCCTTCATTTTATTAGCTACTCTCATCTTAACAAGTTGTATTGAGTCNGAGGCTCAAAAGTGTCGGCCAAGTGGGAGAATCAGAGGAAAGAAAGCACCTCCAGGACAATGCAACCAAGAGAATGATTCAGACTGCTGCATAGAAGGCAAACTTTACACCACATATGAATGTTCACCACCTATGTCCAGCCACACCAAGGCCTACCTCACTCTCAACAGTTTTCAGAAGGGTGGAGATGGTGGTGGCCCTTCAGAATGTGACAACCAATACCATTCTGATGACACACCTGTGGTCGCACTGTCTACAGGCTGGTTCAACCACAGAAGCAGGTGCCTCCACAACATCACCATCACTGCGAATGGAAGAAGTGTCGTGGCCATGGTGGTTGATGAGTGTGACTCGACTGAGGGATGTGATGCAGACCATGACTATCAACCTCCATGTCCCAACAACATTGTTGATGCTTCTAAGGCTGTCTGGAAAGCATTGGGAGTGCCCCAAAATGAATGGGGTGGCCTTGACATTACATGGTGCTGTGTCAGTTCTCTATGGCAAAAAGAACTGAGGACGTATACGAGGATTAATCTTAAATTTATTGACTATGAGACACTTACCATTATCATAATTGCTTTTTAA 669 0.4499 MDRMKRFCSNASFILLATLILTSCIESEAQKCRPSGRIRGKKAPPGQCNQENDSDCCIEGKLYTTYECSPPMSSHTKAYLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHRSRCLHNITITANGRSVVAMVVDECDSTEGCDADHDYQPPCPNNIVDASKAVWKALGVPQNEWGGLDITWCCVSSLWQKELRTYTRINLKFIDYETLTIIIIAF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0740 222 PANTHER LIPID TRANSFER PROTEIN 4 189 - -
Vra4g0740 222 Gene3D - 80 192 IPR036908 -
Vra4g0740 222 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 4 189 IPR039271 -
Vra4g0740 222 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vra4g0740 222 SUPERFAMILY Barwin-like endoglucanases 69 192 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0740 Vra-Chr4 13738478 13739684 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0740 - - vra:106758388 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0740 4 13738478 13739684 Vra9g0595 9 6728264 6729025 PCT