Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0578 ATGTCTAAGTCTGAATATGTTGTTGAGCTTCCTATTTTAGACATTTCTCAGCCATTACAACCATCTTCTCTAACCTCTCTCTCTAAAGCCTGTAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAGCCAGATCCATTATTTATCTAAATACCTCTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAGTCTTACACCCCTCATTTCATTGCCTCTCCATTCTTTGAGAGCCTCAGAATCAATGGACCAAACTATTATGTTTCTGCTAAGAGCTCTGAAGAAATCCTCTTTGATAAACAGAATTCCAGATTCAGTGAGACACTGCAAGAGTATTGCAGCAAGATGGCTGATTTGTCAGAGAAAATTCTGAAGCTTGTGTTGATGAGCTTGGAGGATGGATTTGACAGGGTCTTCTATGATTCTGAATTCAACAAGTGTCATGGTTACTTGAGGATAAACAACTACTCTGCTCCAGAAAGTTTGGAGGATGAAGTTGAGGGGCTTGGAATGCACACTGACATGAGCTGTATAACAATCTTGTACCAAGATGAAATTGGAGGGCTTCAAGTGAAGACACATGAAGGAAAGTGGATAGACATAAGCCCTTCTGAAGGGACACTAGTGGTGAACATAGGAGACATGATGCAAGCATGGAGCAATGATAAACTAAGATCTTCTGAACATAGAGTTGTTTTGAAGCAACCTTTGAACAGGTTTTCATTGGCCTTCTTTTGGTGTTTTGAGGATGAGAAGGTGGTGATGGCACCAGATGAAGTTGTTGGAGAAGGAAACAAGAGGATGTATAATCCATTTGAATGCTTGGAATACTTGAAATTCAGAGAGAACAATCAAAGAGGAAGATTTGAAAAAGTGGGATATACAGTTAAGGATTTTGCAGGAATCAGGTCTCAACTGTGA 960 0.3958 MSKSEYVVELPILDISQPLQPSSLTSLSKACKDWGFFHIINHGISKDLCSQIHYLSKYLFSLPSEAKLKLGPFSSIKSYTPHFIASPFFESLRINGPNYYVSAKSSEEILFDKQNSRFSETLQEYCSKMADLSEKILKLVLMSLEDGFDRVFYDSEFNKCHGYLRINNYSAPESLEDEVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPLNRFSLAFFWCFEDEKVVMAPDEVVGEGNKRMYNPFECLEYLKFRENNQRGRFEKVGYTVKDFAGIRSQL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0578 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Vra9g0578 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 312 - -
Vra9g0578 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Vra9g0578 319 SUPERFAMILY Clavaminate synthase-like 7 298 - -
Vra9g0578 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 262 IPR005123 -
Vra9g0578 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 312 - -
Vra9g0578 319 Gene3D - 2 293 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0578 Vra-Chr9 6475160 6476515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0578 8 290 Glycosyltransferase AT5G59530 28.620 1.52e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0578 - - gmx:100782766 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0771 4 14465441 14466609 Vra9g0578 9 6475160 6476515 PCT