Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0771 ATGTCTAACCCTAAATCTCATGATGGCATTCCTATTTTAGATCTTTCTGAGCCATTGCAGCCATCTTCTGTATTTTCTGTCTATAAAGCAGCCAAAGATTGGGGGGTTTTCTACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCATATCCAATCACTCTCCAAAAACCTCTTCAACCTTCCTTCTCATACTAAACTCAAACTTGGTCCTTTCTCGTCTTTCAAATCTTACACACCTCATTTCATTGCCTCTCCTTTCTTTGAGAGCTTCCGAGTTAATGGACCCAACTTTTATGTTTCTGCTAACACTTCTTTCGAAACTCTCTTAGGCAAAAACGACTCCAAATTCAGTGTGATGATTGAAGAATACGGTAGGAAGATGGAAGATTTGTCAAAGAGAATTGTAAAGATTATGCTGATGAGCTTAGGGGAGGGAATGGAGAAGAAGTTTTATGATTCAGAGTTCAAGAAGTGCGAAGGATACTTGAGGATAAACAATTACTCAGGCGGAGATGTTAAGGAGGAGGAAGTTGAGGGGCTTGGAATGCACACTGATATGAGTTGTATCACCATATTGTATCAAGATGAGATTGGAGGGCTTCAAGTGAGATCAAAGGAGGGAGAGTGGATTGGTATAAGGCCATCAGAGGGAACCCTAGTGTTGAACATTGGAGACATGTTGCAAGCATGGAGCAATGACAAACTCAGGTCTTCAGAACATAGAGTTCTTTTCAACAACCATTTCAACAGGTTTTCTCTAGCCTTCTTTTGGTGCTTCCAAAATGATAAACTCATTTTTGCACCAGATGAAGTTCTTGGAGAAGGAAACAAGAGGATGTACAAACCATTTCTGTGCTTCGATTATTTGAAATTTAGAGAGAACAATGAAAAGGGAAAATTTGATAAGGTTGGCTTCACAGTCAGAGACTTTGCCGGCATCAAGGCTCAATAA 957 0.3992 MSNPKSHDGIPILDLSEPLQPSSVFSVYKAAKDWGVFYIINHGISKDLCSHIQSLSKNLFNLPSHTKLKLGPFSSFKSYTPHFIASPFFESFRVNGPNFYVSANTSFETLLGKNDSKFSVMIEEYGRKMEDLSKRIVKIMLMSLGEGMEKKFYDSEFKKCEGYLRINNYSGGDVKEEEVEGLGMHTDMSCITILYQDEIGGLQVRSKEGEWIGIRPSEGTLVLNIGDMLQAWSNDKLRSSEHRVLFNNHFNRFSLAFFWCFQNDKLIFAPDEVLGEGNKRMYKPFLCFDYLKFRENNEKGKFDKVGFTVRDFAGIKAQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0771 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 81 IPR026992 -
Vra4g0771 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 261 IPR005123 -
Vra4g0771 318 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Vra4g0771 318 SUPERFAMILY Clavaminate synthase-like 6 296 - -
Vra4g0771 318 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 7 311 - -
Vra4g0771 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 311 - -
Vra4g0771 318 Gene3D - 1 293 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0771 Vra-Chr4 14465441 14466609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0771 10 283 Glycosyltransferase AT5G59530 27.891 7.87e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0771 - - gmx:100812108 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0771 4 14465441 14466609 Vra4g0771 4 14465441 14466609 ECH
Vra4g0771 4 14465441 14466609 Vra9g0578 9 6475160 6476515 PCT