Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0575 ATGGACAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTACCAACCTTCACATTCTTCTGTGGATCAAAATGACCATTCAATCACTGAAACTGTTGGATACTCCACATTCAGTGGCGATTCCTTTGCGTATTGCAGGACTAACTCTGAGGTCTCAAACTTCTCTGAGCCTATTGATGACAATAGCTTTGGAAGTGAACATTCACCTTCTCTATGGACACCTGTGAAACATGGAGCAAGTCAAGCTGTTCTTTCAAGGTTAGGAATGAAGCAACCCAGGAACTCAATGGATGATAAATCTGAGGACCTTGATCTCTTGGAGTCAGAGCTTGATATGATGAGGGAAAGATTTTCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCAATCACCAATCTCTATGCAACTGTTTTTGGGCAAAATTTAAAGTTGGAGCCTCTTAATCCTGAGAAAAAGGCCATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGTACAATTGTGGAGATGATGACAAGTAGACCAAGGTCAGATATTTATATCAACCTCCCAGCTCTTCAAAAGCTTGACACAATGCTCATAGAAATATTGGACAGTTTCCATGATACTGAGTTTTGGTATGCAGACCAAGGGAGCTTATCAGGTAACTCAACTCGGTCACGTGCAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTTCCAGTTCCTTGTGTTCACCCTGGAGGCCTCTCTGAAAAGTCAACAAAACACTTGAGTGAGAAAAGAGACTGTGCTAATCAGATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTTGCAGAGATGGACATCCCAGAAACATATATGGCAAATCTTCCCAAGAGTGGAAGAACAAGTTTGGGGGACACAATTTACCGCTATATGTATTCTGCAGACAAGTTCTCACCAGATTACCTTCTTGATTGTCTGAAAATAAGTTCTGAACATGAAGCACTTGAGCTGGCAGACAAGGTTGAGTCTTCAATGTTCACTTGGAGGAGAAAAGCTTGTCTGAGCCATTCAAAAACATCATGGAACAAAGTTAAGGATCTCATGGCTGACACTGACCGAAGTGACAAAAACTACACTTTAGCTGAGAGAGCTGAAACCTTGTTGTTTTGCTTGAAGCAAAGATATCCTGAGCTCTCACAAACATCCTTGGACACATGCAAGATTCAATATAACAGGGATGTTGGAAAAGCAATATTAGAGAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAACAAGGAAATAA 1431 0.406 MDNSSNFDENSDVGYQPSHSSVDQNDHSITETVGYSTFSGDSFAYCRTNSEVSNFSEPIDDNSFGSEHSPSLWTPVKHGASQAVLSRLGMKQPRNSMDDKSEDLDLLESELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLNPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFHDTEFWYADQGSLSGNSTRSRAGSFRRIVQRKDEKWWLPVPCVHPGGLSEKSTKHLSEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRTSLGDTIYRYMYSADKFSPDYLLDCLKISSEHEALELADKVESSMFTWRRKACLSHSKTSWNKVKDLMADTDRSDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSTRK* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0575 476 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 322 475 IPR038937 GO:0005085
Vra9g0575 476 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 323 IPR038937 GO:0005085
Vra9g0575 476 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 322 475 - -
Vra9g0575 476 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 323 - -
Vra9g0575 476 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 475 IPR005512 GO:0005085
Vra9g0575 476 MobiDBLite consensus disorder prediction 1 26 - -
Vra9g0575 476 Gene3D PRONE domain, subdomain 1 344 476 - -
Vra9g0575 476 Gene3D PRONE domain, subdomain 1 104 343 - -
Vra9g0575 476 ProSiteProfiles PRONE domain profile. 101 476 IPR005512 GO:0005085
Vra9g0575 476 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0575 Vra-Chr9 6432992 6436238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0575 - - gmx:100785956 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0575 9 6432992 6436238 Vra9g0575 9 6432992 6436238 ECH
Vra4g0772 4 14471342 14474721 Vra9g0575 9 6432992 6436238 PCT